Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0818 ATGGAAAGCCATGATCCACCACCCCAAAACAACCCTTTTCTCTTCAACCCTTTGGAACCTCAAGAGCAAGGGCTATGTGACTTTGATTCATGGGGTAACCTTTTCTCTGCCCAGAACAGCTTGTTGTTGCTTAATGGTGGCAAGGAAACTATTCAACGTGCTTCTTCTTCCTCTTCATCTTTAATGGCTCAAAATAAGGTAGTTTGCGAGGAGGAAAAGGGTAACAAGGAGAAAAGGAAAGGTGTGAGGGTGAAGAAAACAACACGAGTGCCGAGGTTTGCTTTTCAAACCAGAAGTGCAGATGATGTTTTGGATGATGGTTATCGCTGGAGGAAATATGGACAGAAAGCTGTGAAGAACAGCACATATCCCAGAAGTTACTACCGGTGCACGCACCACACATGCAATGTGAAGAAACAAGTGCAAAGGCTGTCAAAAGACACAAGCATTGTGGTGACAACGTACGAGGGAATTCACAACCATCCATGCGAGAAGCTGATGGAAACTCTAACCCCTCTGCTGAAGCAAATAGAGTTTCTTGCTAGCTTGTAA 552 0.4457 MESHDPPPQNNPFLFNPLEPQEQGLCDFDSWGNLFSAQNSLLLLNGGKETIQRASSSSSSLMAQNKVVCEEEKGNKEKRKGVRVKKTTRVPRFAFQTRSADDVLDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIEFLASL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0818 183 SUPERFAMILY WRKY DNA-binding domain 97 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra4g0818 183 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra4g0818 183 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra4g0818 183 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra4g0818 183 Gene3D WRKY domain 88 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra4g0818 183 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 31 179 - -
Vra4g0818 183 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 179 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0818 Vra-Chr4 15114661 15115792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0818 77 183 WRKY Transcription Factor Family AT5G41570 72.897 6.05e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra4g0818 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0818 - - gmx:100127398 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0818 4 15114661 15115792 Vra4g0818 4 15114661 15115792 ECH
Vra4g0818 4 15114661 15115792 Vra9g0510 9 5363820 5366508 PCT