Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0786 ATGAACAATCTCCCTGAACAATTTTCTCATGGGAGTGAGTCCGATATCTTTGGATCCAAAACGACGCCCTTTTTAATCGAACGCAGCACATCTCAGGTTTTTTCATTTCTCCAATGTTCTTCTGCACAGCGCAGCTTCCCACAAGATCCTGAAATGGGTTATCTGAGCAAATCTTCCAAAACCCTAAGGCAATCGAATTACTTAGCGTTGTTATGCAATTTCAAATTCAATTTCAACCCATTAACCAACAGAATAACCCATGAAGGCTTTCCTGTGAGGCGTGAACTGTTCTGTTCACAGTCACGCCAATACAGCACCTCCACGAGAGAGAAAATCACCATAGATTTGAGACAATACCCTCCAGAGCTCGTTAGAAACTTCTCAATCATTGCGCATGTGGATCATGGCAAGTCCACCCTCGCTGATCGACTTCTAGAACTCACTGGAACAATTAAAAAAGGCCATGGCCAGCCTCAGTATCTTGATAAATTGAAGGTGGAGAGAGAAAGAGGAATCACGGTTAAAGCCCAGACGGCAACAATGTTCTATAAGCACAGTGTAAATGGTGATGATTTCAGTAATGGAAAGGAGTCACCCAGTTTTTTGCTGAATCTTATTGATACTCCTGGACATGTTGATTTTAGTTATGAAGTTTCAAGATCATTGGCAGCTTGTCAAGGTGTGCTTTTGGTTGTTGATGCTGCTCAGGGAGTCCAAGCTCAAACTGTTGCTAACTTTTACCTTGCCTTTGAGTCTAACCTAACAATTGTGCCGGTTATAAACAAGATTGATCAGCCAACTGCTGATCCTGATCGTGTTAAAGCCCAANTAAAATCAATGTTTGATCTTGATCCAAATGATGCACTGCTAACATCTGCTAAAACTGGAGAGGGTCTTGAGCAAATCCTTCCGGCAGTCATAGAGCGTATACCTGACCCTCCTTGTAGGAGGGAATCTTCTCTTCGCATGCTTTTACTTGATTCATATTATGATGATTACAAAGGGGTAATATGTCATGTTGCTGTTGTTGATGGTGTCCTGAGCAAGGGGGATAAGATTTCATCTGCAGCTACTGGTCAGTCTTATGAAGCTTTAGATGTTGGCATCATGCATCCTGAACTTACACCTACTGGTATCTTACTTACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGAACAACCAAAGAGGCCCGTGTTGGTGATACAATTTACCATACTCGGACTTCTGTAGAGCCTCTTCCAGGGTTCAAGCCAGCGAAACATATGGTGTTCTCTGGTCTTTATCCAGCAGATGGATCTGATTTTGAAGCTCTAAATCACGCAATAGAGAGGTTGACATGCAATGATGCNAGTGTCTCTATTACTAAAGAANCTAGCACTGCTCTAGGTCTGGGNTTCAGGTGTGGGTTTTTAGGCCTTCTGCACATGGATGTTTTTCATCAAAGACTTGAACAGGAATACGGAGCTCTTGTTATCTCAACTGTTCCTACCGTGCCTTACAAATTCGAGTTTGCTGATGGAAGCGAGTTAGAAGTTCGGAATCCTGCTTCGTTACCCTCTAGTCCATTACCCTCTAATCCCAAGCAAAGAAGGACAGCCTGCTGGGAACCTACAGTAATAGCTACTATAATCATTCCTATTGAGTATGTGGGACCTGTTATTACCCTTGGCTCTGAGCGTAGGGGTCAGCAGTTGGAGTATTCATTCATTGACAGTCAACGGGTACTCATGAAGTACCGCCTGCCTTTGAGAGAAATTGTTGTTGACTTTTATAATGAATTGAAGAGTATAACATCAGGCTATGCTTCATTTGATTACGAAGACTCAGATTATCAACAAGCTGATCTGGTAAAACTTGATATTCTCTTTAATGGAGAACCAGTTGATGCAATGGCAACCATAGTTCATAGCACAAAAGCATACCGTGTTGGGCGTGAACTGACACAGAAATTGAAAGCTGTCATTGACAGGAAAATGTTCGTGATAATCATACAAGCTGCCATTGGGTCAAATATCATAGCAAGGGAGACGATTCCTGCAATGAGGAAAAATGTTCTTGCCAAGTGTTCTAGTGGTGATGTTAGTCGAAAAAGGAAGCTATTGGAGAAGCAAAAAGAAGGAAAGAAGAGAATGAAGCGAATTGGTTCTGTTGATATACCACAAGAAGCATTTCATAAACTACTAAAAGCTTCTACTTTTGAAGGTATTTGTGTATGA 2220 0.4176 MNNLPEQFSHGSESDIFGSKTTPFLIERSTSQVFSFLQCSSAQRSFPQDPEMGYLSKSSKTLRQSNYLALLCNFKFNFNPLTNRITHEGFPVRRELFCSQSRQYSTSTREKITIDLRQYPPELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLKVERERGITVKAQTATMFYKHSVNGDDFSNGKESPSFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQXKSMFDLDPNDALLTSAKTGEGLEQILPAVIERIPDPPCRRESSLRMLLLDSYYDDYKGVICHVAVVDGVLSKGDKISSAATGQSYEALDVGIMHPELTPTGILLTGQVGYVVSGMRTTKEARVGDTIYHTRTSVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKEXSTALGLGFRCGFLGLLHMDVFHQRLEQEYGALVISTVPTVPYKFEFADGSELEVRNPASLPSSPLPSNPKQRRTACWEPTVIATIIIPIEYVGPVITLGSERRGQQLEYSFIDSQRVLMKYRLPLREIVVDFYNELKSITSGYASFDYEDSDYQQADLVKLDILFNGEPVDAMATIVHSTKAYRVGRELTQKLKAVIDRKMFVIIIQAAIGSNIIARETIPAMRKNVLAKCSSGDVSRKRKLLEKQKEGKKRMKRIGSVDIPQEAFHKLLKASTFEGICV* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0786 739 Pfam Elongation factor Tu GTP binding domain 124 311 IPR000795 GO:0003924|GO:0005525
Vra4g0786 739 Pfam GTP-binding protein LepA C-terminus 625 730 IPR013842 -
Vra4g0786 739 SUPERFAMILY EF-G C-terminal domain-like 423 500 IPR035647 -
Vra4g0786 739 SUPERFAMILY Translation proteins 295 408 IPR009000 -
Vra4g0786 739 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 162 177 IPR031157 -
Vra4g0786 739 Gene3D - 122 314 IPR027417 -
Vra4g0786 739 TIGRFAM small_GTP: small GTP-binding protein domain 128 302 IPR005225 GO:0005525
Vra4g0786 739 Gene3D Elongation Factor G (Translational Gtpase), domain 3 415 496 - -
Vra4g0786 739 CDD EF4_II 321 406 - -
Vra4g0786 739 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 122 314 IPR000795 GO:0003924|GO:0005525
Vra4g0786 739 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 112 730 - -
Vra4g0786 739 CDD lepA_C 537 616 IPR035654 -
Vra4g0786 739 SUPERFAMILY EF-G C-terminal domain-like 536 630 IPR035647 -
Vra4g0786 739 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 330 IPR027417 -
Vra4g0786 739 Gene3D Translation factors 317 414 - -
Vra4g0786 739 PRINTS GTP-binding elongation factor signature 126 139 IPR000795 GO:0003924|GO:0005525
Vra4g0786 739 PRINTS GTP-binding elongation factor signature 169 177 IPR000795 GO:0003924|GO:0005525
Vra4g0786 739 PRINTS GTP-binding elongation factor signature 204 214 IPR000795 GO:0003924|GO:0005525
Vra4g0786 739 PRINTS GTP-binding elongation factor signature 256 265 IPR000795 GO:0003924|GO:0005525
Vra4g0786 739 Gene3D - 616 690 IPR038363 -
Vra4g0786 739 Hamap Elongation factor 4 [lepA]. 120 736 IPR006297 GO:0005525
Vra4g0786 739 Pfam Elongation factor G C-terminus 537 622 IPR000640 -
Vra4g0786 739 CDD EF4_III 422 497 - -
Vra4g0786 739 Gene3D - 497 615 - -
Vra4g0786 739 CDD LepA 125 313 - -
Vra4g0786 739 PANTHER TRANSLATION FACTOR GUF1-RELATED 112 730 IPR006297 GO:0005525
Vra4g0786 739 TIGRFAM lepA: elongation factor 4 124 731 IPR006297 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0786 Vra-Chr4 14631843 14636612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0786 124 265 Eukaryotic Initiation Factors Gene Family AT1G56070 40.278 2.57e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0786 K21594 - gmx:100781092 1174.46