Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0785 ATGAAAAACAGACCAGGATTCCAAGAAATCCTAGACCACAACGATGGAGCATACTACAATGACATAGAGTTCTTCTTCCTCGTAGAGCCATTGTTATATGTCTGTTCGGTTGCTAACACGCCACAGGGTTGTTGTTGGCAGCATATTTTTATTTTGGGATATCATAGTATAAAGACCAAACAGGAGCAACCTGAATTCCTTGTTCCACTTGTTGTGGTTTCACAAGCAATAACTTTTTCTGTTCTGTGTCACTTTTGTTTTCTTGAGTTCGATCTATCCATGTTGGACTTCGTAGGCCCAGTGTTGGAAATCATAATTCGCTTGTGGGACTGTTGTGCCTGCGTCCGTGATTATGAAGAGAACCTTTCTTGTTTGAGGGACATGACGTCTGACCTTCTAGGCCTTTGGGTTGATGTGAGTGTGAAGGTTCAACTGGCTGAGGAACAGCAGCTGAGGCGTCTGAATGAAGTGAATGATTGGTTGGTTAAAGCTGAAGCCATGCAAAGAGAAGTTCAAGCTATTCAGCAGAGAGTTGCTCATGCTCAAGAAACACGTATCAGATGTTTGATAAATTTTCCGACAAGCTTCAGGATGGGAAGGATTGTAAGTAAGAAAATAGGTGAGATTCGTGAACTTATTGATAAAGGGCACTTTGATGTAGTGGCTCAGGAAATGCCATATGCTGTGGTAGATGAAATCCCTCTGGAGGTTACAATAGGTCTAGAATCAACCTTTGATGAACTTGGTGAACGTTTTGATGATAATAATGTGGGAATTATTGGCTTGTTTGGCATGGGGGGTGTAGGAAAGACAACCCTGCTCAAAAAGTTCAACAATGAGTTTCTTCCCACAAAATTCTATGATGTAGTCATTTGGGTTGTGGTGTCTAAAGAAGCAGATGTAGGGAGTGTTCAACAAAGCATAGGAAACAAATTAAATGTTCCTGTCGGTAAATGGGGTGGTAAGAGCATTGATGACAGAGCTATTGTTTTATACAACTTTTTAAAGAGGAAGAAGTTTGTGTTGCTGCTAGATGATTTATGGGAGCGTATAGATCTTCTGAAGTTGGGGATTCCTCTCCCTGATACAGAAAATGGATCTAAAGTAATATTCACAACAAGGTCCATGGATGTTTGCAGGAACATGGAAGCCAACACATGCATCAAAGTAGAATGTTTAGCACCAAATGAAGCATTTGCATTGTTCAGAGAGAAAGTGGGTGAAGAAACTCTCAACTCTCATCCTGAAATATTTCATCTGGCTAAAATTGTGGCCAAGGAGTGTGAGGGACTTCCTTTAGCTCTCATCACTGTTGGAAGATCTATGGCTCGAAAGACTCTCCCCGAATGGAAACGAGCAGCACGAACTTTGAAGATTTATCCATCAAGATTTTCAGGTATGGTTGACTATGTTTATTGTTTGCTAGAGTTTAGCTATGACAGTTTACCAAGTGCCTCGCACAAGTCTTGTTTCTTGTACTGTTCCATCTTCCCTGAGGACTATGATATTAGAAAAGATGAACTCATTCAACTGTGGATTGGGGAAGGTCTTTTAGCTGAATTTGGTGATGATGTCTATGAGGCACGAATCCAAGGAGAAGAAATCATCGCAAGCTTGAAGTTTGCTTGTTTGTTGGAGGACAGTGAGAGAGAAAATAGGATTAAGATGCATGATGTGATCAGAGACATGGCTTTGTGGCTAGCTTGTGATCATGGATCCAACACCAGGTTCTTGGTGAGAGATGGTGCAAGCAGTGGTTCAGTTGAAACATATAATCAGGCAAAGTGGAAAGAAGTAGAGAAACTATCAATGTGGCGGCAAAGCATTCAGAAACTATCAGGAAAACAAGATTGCTCAAATCTCTTGACAATGCTCGTTAGAAATACCGAGATAACCAACTTCCCAGATGAGATTTTTCTGACTGCAAATCATCTTAGAGTGTTAGACCTGTCAGGTAATAAAAGAGTAAGAGAATTACCTTCCAGCATCGGGGAGTTAGTTCAATTGCAGCATTTGGATCTATCAGGTACTGGCATACGAAAATTGCCAAGGGAGCTCCAGAACTTGAAAAAATTGAGGTGCCTGCTGCTGAATTATATTTGCAACAGGCTTGTCTTCCCAAGGAATTTGATATCAAGTTTGGTGTCATTGCAAGTGTTTAGCAAATTACCATGGGAAGATCAGTTTATTCTTCCTGCCTTGGGGGAACCTGAGGAAGCTGTGTTGTTGAAAGAACTGGAATGCTTGGAATATCTTCAAGACATAAGCATTGCTCTCTTTTGCGTTTCTTCTATGCAAGTATTACTGAACTCTTCCAAGTTGCAAAGATGCATTAGACATCTCAGAGTACTTTCTCCATTCACTTCAACGCCACATACTATATTGTTCTCACTTTTGACAAAAATGCAACATCTAGAGGTATTATCCATGTCAGTTTCTTCTCCTTCAAGTTTAGATCATGTCAGGAAAAAGGGGTCTCCATCATCACAGTGTTCTATGACAGAGTGCATTCCCATGAGTTCAAAGCTTACTGAGCATGATTACATTGTTGGCCTCCGTGAGTTATCCCTTGAAGGGTGTGGCATGCTGAACTTGAATTGGCTCACTCGTGCTCAAAGCCTTCAAATCCTTAGAATATACAATTGTCCCTCCTTGGAAGAAGTCATAGGTGAAGAATTTGGCCATTCAGAAAATGTTTTTTCAAGTCTTGAAATTGTTGATCTAGATTCTTTACCAAAGTTAAGGAGCATATGCTCACAGGTTTTACAATTTCCTTGTCTTAAGGAAATCTGTGTAGCAGATTGTCCAAAGCTGATAAAGCTCCCTTTTGATTCCAATAGTGCAAGGAACAGTCTTAAGCACATTAATGGACAGAAAAGTTGGTGGCGTAAATTGCAGTGGGAAGATGAAGCCACAAGGGATCACTTTGCTTCAAGATATGTACCTTTGCGCAAAATTCTGAAAATACGTTGA 2973 0.4057 MKNRPGFQEILDHNDGAYYNDIEFFFLVEPLLYVCSVANTPQGCCWQHIFILGYHSIKTKQEQPEFLVPLVVVSQAITFSVLCHFCFLEFDLSMLDFVGPVLEIIIRLWDCCACVRDYEENLSCLRDMTSDLLGLWVDVSVKVQLAEEQQLRRLNEVNDWLVKAEAMQREVQAIQQRVAHAQETRIRCLINFPTSFRMGRIVSKKIGEIRELIDKGHFDVVAQEMPYAVVDEIPLEVTIGLESTFDELGERFDDNNVGIIGLFGMGGVGKTTLLKKFNNEFLPTKFYDVVIWVVVSKEADVGSVQQSIGNKLNVPVGKWGGKSIDDRAIVLYNFLKRKKFVLLLDDLWERIDLLKLGIPLPDTENGSKVIFTTRSMDVCRNMEANTCIKVECLAPNEAFALFREKVGEETLNSHPEIFHLAKIVAKECEGLPLALITVGRSMARKTLPEWKRAARTLKIYPSRFSGMVDYVYCLLEFSYDSLPSASHKSCFLYCSIFPEDYDIRKDELIQLWIGEGLLAEFGDDVYEARIQGEEIIASLKFACLLEDSERENRIKMHDVIRDMALWLACDHGSNTRFLVRDGASSGSVETYNQAKWKEVEKLSMWRQSIQKLSGKQDCSNLLTMLVRNTEITNFPDEIFLTANHLRVLDLSGNKRVRELPSSIGELVQLQHLDLSGTGIRKLPRELQNLKKLRCLLLNYICNRLVFPRNLISSLVSLQVFSKLPWEDQFILPALGEPEEAVLLKELECLEYLQDISIALFCVSSMQVLLNSSKLQRCIRHLRVLSPFTSTPHTILFSLLTKMQHLEVLSMSVSSPSSLDHVRKKGSPSSQCSMTECIPMSSKLTEHDYIVGLRELSLEGCGMLNLNWLTRAQSLQILRIYNCPSLEEVIGEEFGHSENVFSSLEIVDLDSLPKLRSICSQVLQFPCLKEICVADCPKLIKLPFDSNSARNSLKHINGQKSWWRKLQWEDEATRDHFASRYVPLRKILKIR* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0785 990 Coils Coil 157 184 - -
Vra4g0785 990 Gene3D - 393 478 IPR042197 -
Vra4g0785 990 SUPERFAMILY L domain-like 546 957 - -
Vra4g0785 990 Gene3D - 227 392 IPR027417 -
Vra4g0785 990 Gene3D Ribonuclease Inhibitor 579 964 IPR032675 -
Vra4g0785 990 Pfam NB-ARC domain 244 480 IPR002182 GO:0043531
Vra4g0785 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 494 IPR027417 -
Vra4g0785 990 PANTHER OS12G0491200 PROTEIN 125 973 - -
Vra4g0785 990 Gene3D - 479 565 IPR036388 -
Vra4g0785 990 PRINTS Disease resistance protein signature 259 274 - -
Vra4g0785 990 PRINTS Disease resistance protein signature 334 348 - -
Vra4g0785 990 PRINTS Disease resistance protein signature 428 442 - -
Vra4g0785 990 PRINTS Disease resistance protein signature 640 656 - -
Vra4g0785 990 Pfam Leucine rich repeat 620 678 IPR001611 GO:0005515
Vra4g0785 990 PANTHER DISEASE RESISTANCE PROTEIN RP 125 973 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0785 Vra-Chr4 14628768 14631740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0785 239 564 WRKY Transcription Factor Family AT5G45050 25.444 2.25e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0785 - K13459 vra:106758404 1969.13