Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0780 ATGGATAAAGAGAAAACCTCACAAACCCCAAGAAGAATGACAAGGTCTTCGGCTTCATCTCCGACATCCACTTCAAATAATGTAATTGCAGCAAAAGTAAATAGCCTTGAACCTTTGACAATCAACGACCTTTTAGTTGGAGGAGATCCAATCAGTCTAGATGACATAATTTCCAACTTTCCTGGTAGAAGAAACCAGATTCTTGAGATTGTGCGTCTTTTGGGACCTTTGAATTCACCAATGCTTCCTTTGTTTGTATATGGAGGCCCTTGTACTGGAAAAACCAGTGTCATTCTTCAATTGTTCAGGCATCTTAACAGGCCTCTCGTTTATTCTAGTTGTAGGACATGTTATAACCAGGGTATCTTGTTTGAATCTATTCTGAATCAGTTATTTCTCCATAGAAAAAATGCTGCCAATGGTTATGCAAATGCAAAACGCTGTGACAGACCGTCTGATTTTGTCAACTTTCTTCGGGAAGCATTGACCAATGTTATAAACAACCTCAAAGAGAAGTCAGAGATGTTGGTCTCAAATAAGATGAGACAAGAGAAAATTGGAAACATGATCTACTTGGTTTTTGACAATTTTCATCTTGTTAGGGAATGGGATAAGAGTTCTACTATATTGCCCGTACTGTTTAATCTCTACGATATGCTAAAGATGCATGAGGTGGGTCTGATTTTTATCAGTAGTACTTCCCCAGACACATTTTACTCCAACATGGGATATGTAGAGCCTATCCCCGTTTACTTTCCTGATTATACAGAAGGTGATATTCGTCAAATATTATTAAGAAACCAAGTGAACCAGAAGCTTTATTCCTCATTTCTCGATGTGGTTCTGAAGTCTTTTTATGGAATTACAAAGCAAGTTGGTGATTTGTCTGCCGCCTTAAAGCCACTATATGAAAAATATTGTGAACCTTTAAGTGATAAGGGAAAGGGAGTTGCTCCTGATCAACAGATGAGGCGAAGGCTGCTTGCTCATATCAACCCTCATATTGGCCCCTCTTTGAATGAGATATTTAAGGTTTCATCCCTTTCTTCTACTGAAGTGGATGCCCTGAAAGACGAAAAGCGGAAGGGAAATCCCAGGAGATTGGAGAAATCTGAAGAACTAGGCAGTCTTGATTTTCATATGTCTACTAGTGCAAAGTATCTTCTGATTTCAGCATTCCTTGCCTCCAGAAACCCAGCTACTCTTGATGCTTCTCTTTTTGATTCCAGAGGTGGTTCTGATAATCGAAAGCGGAAGAGGAAGCCTTCTGAGAAAGCGATGGAACGGAAAGAAACTTTGGAAGAGGAGCTACTAATGAAAGGACCTGGAACTTTCCCATTGGAGAGGTTATTAGCCATCTTTCAGTGCCTTGTATCAGTTGCGGAAGATGAGGAAGAACCAAACAATGATGGATTTGGAGTTGAGGGTGGCAGTGCTGGACTGATGTCTGATGTTCTTTTGCAGCTGTCTAGTCTCTGCAATGCTAATTTTATATTCAAAGGTAGAAGCTGTCCAATTGAGGGCTCAACCCGGTATCGATCAACCATTTCCGAAGATCTGGCTTTGAAGATCTGCCAAGTGCTTCTGCCATCAACATGA 1599 0.4046 MDKEKTSQTPRRMTRSSASSPTSTSNNVIAAKVNSLEPLTINDLLVGGDPISLDDIISNFPGRRNQILEIVRLLGPLNSPMLPLFVYGGPCTGKTSVILQLFRHLNRPLVYSSCRTCYNQGILFESILNQLFLHRKNAANGYANAKRCDRPSDFVNFLREALTNVINNLKEKSEMLVSNKMRQEKIGNMIYLVFDNFHLVREWDKSSTILPVLFNLYDMLKMHEVGLIFISSTSPDTFYSNMGYVEPIPVYFPDYTEGDIRQILLRNQVNQKLYSSFLDVVLKSFYGITKQVGDLSAALKPLYEKYCEPLSDKGKGVAPDQQMRRRLLAHINPHIGPSLNEIFKVSSLSSTEVDALKDEKRKGNPRRLEKSEELGSLDFHMSTSAKYLLISAFLASRNPATLDASLFDSRGGSDNRKRKRKPSEKAMERKETLEEELLMKGPGTFPLERLLAIFQCLVSVAEDEEEPNNDGFGVEGGSAGLMSDVLLQLSSLCNANFIFKGRSCPIEGSTRYRSTISEDLALKICQVLLPST* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0780 532 MobiDBLite consensus disorder prediction 410 431 - -
Vra4g0780 532 MobiDBLite consensus disorder prediction 1 25 - -
Vra4g0780 532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 272 IPR027417 -
Vra4g0780 532 Gene3D - 60 241 IPR027417 -
Vra4g0780 532 MobiDBLite consensus disorder prediction 11 25 - -
Vra4g0780 532 MobiDBLite consensus disorder prediction 404 431 - -
Vra4g0780 532 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 526 IPR020796 GO:0000808|GO:0005634|GO:0006260
Vra4g0780 532 Pfam AAA ATPase domain 59 215 IPR041664 -
Vra4g0780 532 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 250 526 IPR020796 GO:0000808|GO:0005634|GO:0006260
Vra4g0780 532 Coils Coil 159 179 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0780 3 528 Core DNA Replication Machinery Family AT4G29910 57.143 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0780 K02607 - gmx:100782175 889.026