Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0773 ATGGCAAAGAGGTCACAAAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGATTTTCGTCATGCTCGATTTACTCGGAAGTTGATAGCAGATAAGAGGCATGGAAGCAAGCATGCTTTTGGTGCGCCACTTACCAAGAACAAGTTTGAAGTATTGAGCAATTTGGGTGAAAACTATGAAGGCAATTTTGACAGGGAAGAGAGTAAGAGACTAACACTGACAACTGATGCTGAAAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAAATGATCACTGACCAAGATGAAATAAAGGATCAAGGTAACGTGGAAGTGGAATCAAAGCAATCCAGATTAGTGCGTGATGAACCCCAGAAGACAGATTCCAAAAGAAAGAAGAAATCTCGCAAGAAAAACCGTGACTTGAAATCAGATGCAACCTTAAAATCAGAGTTTTCACATAAGAAGCATTCAAGGGAACAGTCAAAAGATACTATAGATTTGGACAAAATAATGGATGATTTTTGTCATGTTGAAGCTGCTTGTTCTATGATGTTTGACAATGATGGCAAAATTGATGCGCAGTCAAACCAAAAGAATGTTATGTCTGAAAACCTTGCTAATGCAATCCATGAATTTGTGAATCAGATGAGATTGAATGGGAAAGATCTGCATGAAGATGGACAATTCCTTAGCTCACGTGAACTCATGGAAGCACTTCAGGTCATAAGTTCAGATAAGCAATTGTTCCTTAAACTTCTACAAGAGCCAAATTCGCACTTGCTGAAATACATTCAGGAGTTTGAAAATGCTCAAGGGAGAGATGGCAAAGAATGCAGTTCACTTACTGCTTCCAACTGCTCTGAACTAGAACTTGTTAGTCTAAAACAAACTAGGGAGAATACAAACCGTAAGCATCTTAACTTTTTCAGGAAAAGGGGGAAGTCTCCATCAAAAGATCTGACAAATGAAAACGGAAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAACTGGCATTCAAATTTCTGAAAGTGAAAGCAACCTTGCCTCATTGCTAGATTCTGGTGATGTTGCCCATTGCAAAGGTCCTTCTGTGAGAGTTGGTTCTCATTTTTCTCTTACAGAGATAAAAAGAAAATTGAAACATGCCATGGGAAAGGAGAGGCATGGAAACCCTGAAGTAATCCCACGAAAGCTCCCTGTTGAACGTCAAAAGAAGTTGCCAAGAGGCAAATGCAAAGATAATACTGGAATGAGATCTCCTAATAAAGACCATTTCTTCATTGAAAAGATTGCAAGACCAATGTTTGATGTTATGAAGGGGAACAGGACTGATACACTCAAGGACTCTGAAATGATCGTAGAACAAGAAAGTGGTATTCCCAAGCTTAGTGCTTCTAACTTATATGTTGAGGCAAGGAAACATCTGTGTGAGATGCTAGATAATGGTGATGAAAACACAAACATTTCAAGCAGGCAGATTCCCAAAACCCTTGGGAGAATACTTTCTTTTCCCGAGTACAACTTTTCACCTCTAGAAAGTCCTGCAAGGGATTTTGAGCATCATTCTGTGGCTGCACAGGCAATATCTTCTCCCTCTGGAAAAACTAGGGAAGTTAGTGAGGATATTTCCTCCCCAGAACCAGCAACCTCGGTTGGTTTTCCAGCTCAGGAAACTAACAGTTCAGAAGAGAAGTCATGCGTTTGTGATGGAATCTCTAATAATAAAGTACAAGAAATTAAGCCAGTGTCAAATTTCTCCAATGATGTTGGTCCTGTTGATACATCTGAAGTCTGTTGTCCTATTAGAGATGTGACAGTCACTGAAGACAATGTTGAACCTGCAGAAGAGAAAAAAGGGTTGGAATCAGATCTGAATGGCTTCATCGTAGGACAGGACCAAAAAATTGATATCTCAGAAGCTCCTGATGGTGCAAAATGTTCTGGATGTTTGAATCAGGATGAGGATATAACAGAAGAGAACCAACTATCATCTCTACCGACGTCTCCTCACTCTTTGATCTCTAAGAAAAATGGAGAGCTAGAATGTGGTATAGATTTATCTGGGGGACCGAGTCCTGTATCTGTTCTTGATACATCATTTTCAGATGATGACTCTGGACACTCCAGATGTCAACCTGTTAACTTACCAGTACAACCTCTACAAATTCAATTTGAAGAACACGAATCTTCACCTGCAGAACAATTTGACACAGGAAAATATAGTTTTGGAGAAAATGAATTGATATATGATTACATCAAAGTTGTCTTGCTTGCCTCTGGTTTGACAAGAGATCAGTTGTTGGTGAAATGCCATACCTCTGACAAAATACTAGATCCTTCCCTCTTTGATCAAGTAGAGTTCTTCTCCAACCTGCTTTGCCACGACCAGAAGCTCCTATTTGACTCTATCAATGAGGTCCTGACGGAGGTTTGTCAGCATTATTTTGGGGTCTCACCTTGTGTTTCATTAGCAAATCCTTGCATGAGGCCAGCTCCAAGTATGAAAAGGCTTACCTTCAAGGTCTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCACCACGCACATTAGAGCAAATTATTAGGAAAGACATGGCAAGAAGGGGAACTTGGATGGACCTTGAACTTGATGCTGAAACAATTGGTTTTGAAATGGGGGAGGCCATTCTTACTGAACTGATGGAAGACACAATTTTGAGTCTTGTGAGTGAAAGTTCAGTAAGTATTTAA 2760 0.3989 MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADKRHGSKHAFGAPLTKNKFEVLSNLGENYEGNFDREESKRLTLTTDAEKLSVKKLIEEEMITDQDEIKDQGNVEVESKQSRLVRDEPQKTDSKRKKKSRKKNRDLKSDATLKSEFSHKKHSREQSKDTIDLDKIMDDFCHVEAACSMMFDNDGKIDAQSNQKNVMSENLANAIHEFVNQMRLNGKDLHEDGQFLSSRELMEALQVISSDKQLFLKLLQEPNSHLLKYIQEFENAQGRDGKECSSLTASNCSELELVSLKQTRENTNRKHLNFFRKRGKSPSKDLTNENGKTEFSNRIVILKPALTGIQISESESNLASLLDSGDVAHCKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVIPRKLPVERQKKLPRGKCKDNTGMRSPNKDHFFIEKIARPMFDVMKGNRTDTLKDSEMIVEQESGIPKLSASNLYVEARKHLCEMLDNGDENTNISSRQIPKTLGRILSFPEYNFSPLESPARDFEHHSVAAQAISSPSGKTREVSEDISSPEPATSVGFPAQETNSSEEKSCVCDGISNNKVQEIKPVSNFSNDVGPVDTSEVCCPIRDVTVTEDNVEPAEEKKGLESDLNGFIVGQDQKIDISEAPDGAKCSGCLNQDEDITEENQLSSLPTSPHSLISKKNGELECGIDLSGGPSPVSVLDTSFSDDDSGHSRCQPVNLPVQPLQIQFEEHESSPAEQFDTGKYSFGENELIYDYIKVVLLASGLTRDQLLVKCHTSDKILDPSLFDQVEFFSNLLCHDQKLLFDSINEVLTEVCQHYFGVSPCVSLANPCMRPAPSMKRLTFKVWEGVCWHVLPLPPPRTLEQIIRKDMARRGTWMDLELDAETIGFEMGEAILTELMEDTILSLVSESSVSI* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0773 919 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 915 - -
Vra4g0773 919 MobiDBLite consensus disorder prediction 534 567 - -
Vra4g0773 919 MobiDBLite consensus disorder prediction 107 132 - -
Vra4g0773 919 Pfam Domain of unknown function (DUF4378) 759 906 IPR025486 -
Vra4g0773 919 MobiDBLite consensus disorder prediction 143 167 - -
Vra4g0773 919 PANTHER (, RELATED) 1 915 - -
Vra4g0773 919 MobiDBLite consensus disorder prediction 107 167 - -
Vra4g0773 919 Pfam Protein of unknown function (DUF3741) 218 262 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0773 Vra-Chr4 14477522 14483973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0773 1 894 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.516 1.59e-92 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0773 - - gmx:100783243 1397.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0773 4 14477522 14483973 Vra4g0773 4 14477522 14483973 ECH
Vra4g0773 4 14477522 14483973 Vra9g0570 9 6378853 6385189 PCT