Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0755 ATGAGGAGAAAGAAGGGAAAACACACTAATCATCGGTTCTGCGCCTACCAAACCGAAATCATGGTGGAAGATGGTGACGAGGTTGCAGTTGATGCACGTTCCACAGAAGACTGGTTGTTGCATGCACAGGAACTTGTTCCCGTTGTTCTTGATAAAGCAAGAGAGGCTAAGGGATTTGCCGGTAGATGGAAGATGATCATTGCAAAATTGGAACAGATCCCGTCACGATTATCCGATTTGTCAAGCCATCCGTGCTTCTCAAAAAATGCTTTATGCAAAGAGCAGTTGCAGGCTGTGTCAAAGACGCTTGGGGAAGCGATTGAATTAGCCGAGTTGTGTATGAAGGAGAAGTACGAGGGTAAGCTTCGGATGCAGAGTGATCTAGATGCATTGACTGGGAAGCTTGATTTGAATTTGAGGGATTGTGGGCTTTTGATCAAAACTGGTGTGCTGGGTGAGGCTACTTTACCGTTGGCCGTGTCAAGTTCTGTGGCAGAATCAGATATTGCAATACACAACAACATAAGGGAATTGCTGGCGCGTCTTCAGATCGGGCACTTGGAAGCAAAGCACCAAGCTCTAGACAGCGTTGTTGAGGCCATGAAGGAAGATGAGAAGAATGTTTTAGCGGCTCTTGGTCGAAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGGATAAGAGAGAAAACAGTTACTGTTATATGCTCGCTTGCAGAATCTGGTAGTTGCGAGAATTGGCTAGTTTCTGAGGGAGTTCTGCCACCTCTTATAAGGCTTGTAGAATCTGGCAGTGCAGTGGGGAAGGAGAAAGCCACGATATCTCTTCAGAGGTTGTCTATGTCAGCCGAAACAGCTCGCGCAATCGTGGGGCATGGTGGGGTTCCTCCATTGGTTGAACTTTGTCAAATTGGTGACTCTGTGTCACAGGCTTCGGCTGCTTGTACTCTGAAGAACATATCAGCTGTGCCTGAGGTGAGACAAACTTTGTCGGAAGAAGGGATTGTGAGGACCATGATCAATCTTCTTAACTGTGGTATTCTGTTAGGTTCCAAAGAGCATGCTGCAGAATGTTTGCAGAACCTCACTGCAAGCAACGAGAATCTAAGGAAGAGTGTCATATCAGAAGGTGGTGTTAGGAGTCTTCTGGCTTATCTTGACGGTCCACTTCCTCAAGAATCCGCTGTTGGAGCATTGAGGAATTTGGTCGGATCGGTCCCTGAGACATCCTTGGTCTCTCTCGGTTTGGTCCCCCGATTGGTTCACGTGTTAAAGTCGGGATCTTTAGGTGCTCAGCAAGCAGCCGTAGCCGCCATATGCAGAGTTTGCAGCTCGACAGACATGAAGAAAATGGTTGGTGAAGCTGGATGCATCCCTCTCCTCGTGAAAATGCTAGAGGCTAAGTCAAACAGTGCTAGAGAGGTTGCTGCACAAGCAATTGCAAGCCTAATGGTTGTGTCTCAGAACAGGAAAGAAGTTAAAAAGGATGATAAAAGTGTGCCAAATTTGGTTCAGTTGCTTGATCCAAGTCCTATAAACACTGCAAAAAAATATGCAGTCACATGCCTCGGATCACTTTCTTCCAGTAAGAAATGTAAGAAGCTAATGATCTCGTATGGGGCTATTGGGTATCTCAAGAAACTTACTGAGATGGACATTCCAGGAGCTAAAAAGCTGCATGAACGGTTGGAAAGAGGGAAATTGAAAAGTTTTTTTAGCAAGAAATAG 1740 0.4592 MRRKKGKHTNHRFCAYQTEIMVEDGDEVAVDARSTEDWLLHAQELVPVVLDKAREAKGFAGRWKMIIAKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCMKEKYEGKLRMQSDLDALTGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDIAIHNNIRELLARLQIGHLEAKHQALDSVVEAMKEDEKNVLAALGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETARAIVGHGGVPPLVELCQIGDSVSQASAACTLKNISAVPEVRQTLSEEGIVRTMINLLNCGILLGSKEHAAECLQNLTASNENLRKSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPETSLVSLGLVPRLVHVLKSGSLGAQQAAVAAICRVCSSTDMKKMVGEAGCIPLLVKMLEAKSNSAREVAAQAIASLMVVSQNRKEVKKDDKSVPNLVQLLDPSPINTAKKYAVTCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERLERGKLKSFFSKK* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0755 579 Gene3D - 414 559 IPR011989 -
Vra4g0755 579 Gene3D - 167 352 IPR011989 -
Vra4g0755 579 Gene3D - 353 413 IPR011989 -
Vra4g0755 579 SUPERFAMILY ARM repeat 175 556 IPR016024 -
Vra4g0755 579 SMART arm_5 369 408 IPR000225 GO:0005515
Vra4g0755 579 SMART arm_5 449 489 IPR000225 GO:0005515
Vra4g0755 579 SMART arm_5 490 532 IPR000225 GO:0005515
Vra4g0755 579 SMART arm_5 204 244 IPR000225 GO:0005515
Vra4g0755 579 SMART arm_5 286 326 IPR000225 GO:0005515
Vra4g0755 579 SMART arm_5 409 448 IPR000225 GO:0005515
Vra4g0755 579 SMART arm_5 327 368 IPR000225 GO:0005515
Vra4g0755 579 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 21 579 - -
Vra4g0755 579 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 21 579 - -
Vra4g0755 579 Pfam Armadillo/beta-catenin-like repeat 450 487 IPR000225 GO:0005515
Vra4g0755 579 Pfam Armadillo/beta-catenin-like repeat 290 326 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0755 421 562 U-box Gene Family AT2G23140 31.250 2.11e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0755 - - gmx:100781453 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0755 4 13903233 13906900 Vra4g0755 4 13903233 13906900 ECH