Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0745 ATGGCGAGCCCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAATGGTGTGATTCCAAACGAGGGTTTGGCATCTTTTATGAAAAGGATGTTTCTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCCATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTGGATGACAGGTTACTAATAATATTGTTATTGACTGTGGAGCGGTTGCGTAAGAATTCTCTATGGAAGCCGTACCTCGATATGCTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAACTGAGAGGAACAACATTATATCGTGCGACTGAGTTGCAGAAGAAAAGCCTGCTTTCTCTGTATGAAACTAAAGTGAAGGATATAGTGAAGAAACTTTTGACTCTTGATGGGAATTCAGAGATGTATGGTGAGGTGTGCTTTGAAGATTTCCTTTGGGCGAATTCAGTATTTTGGACCCGTGCTTTAAACATTCCAATGCCTCGATCCTATGTATTTCCAGAAATGCAAGATGATCATGGCAGTTGCATTCCTGAAGCTGATGAAAAAAGAAACCAGGTTAAAAAATCTAACAATCTGACCACGAAAGCGGCATGTAACAGTTGCACAGTGACAGGAGAAACTGTTTGGGTGGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTAAAGCCGATAGCAACGTGGGAAGTTGATGGAACTGGTTTAGCAACAGGAGTTCCTTTCTCCATGTATCTTATTTTGGCTGCTCAAAGTGACTTGCAAAATGACCAAGAAATTTCTATTAGTTATGGAAACAAGGGAAATGAGGAACTTCTGTATCTGTATGGTTTTGTCATTGATGAGAACATAGATGACTATGTCATGGTCCACTATCCAGCAGAAGCTATGAATACTATTTCCCTTTCAGAGTCCAAAGGGCAGCTTCTCGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACACAAAACGTTTCTGGATAATGGGTTTTTTCCGCTAGGGACCCAAATCAGTGGAGAAGATAACAAGGGAAAAGCTGAACAAGTTTGCAACTATAGTTGGAGCGGTCAGCGCAAGATGCCATCTTATGCAAACAAGCTAGTGTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGAAGAGCTTTACAAGGTTTCATCAATGCTGGAAGAGCTTGCTGGACCTGAAAGGGAGAGAGAACTATCAGATACAGATGTCCAATCAGCAGTATGGGAGGTCTGTGGTGATACTGGAGCTTTACAATTGCTTGTTGATCTTCTTCGTGTGAAGATGATGAATCTTGAAGAGAGTTCTGGAACAGATGAAGATGACCTTGATTTACTCAGGAAAGCCCTTATTACTGATGACCAGGAAGATAGCAAACAATGCACGAGCAATTTAAGCACAAAGACAGATGACTCTAAGGAGCCAAAGTTGATGACTAGAAACAAGTGGTCTGCTATAGTATATCGGCGTGGACAGAAACAGCTAACAAGGTTATTCCTGCAAGAAGCAGAACATGCTTTGCAGTTATCACTGAATGAAGAAGAGGTGACTTCTTGCTAA 1689 0.418 MASPEEAKLETFMQWLQANGVELRGCKIKWCDSKRGFGIFYEKDVSDGVMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRLLIILLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDIVKKLLTLDGNSEMYGEVCFEDFLWANSVFWTRALNIPMPRSYVFPEMQDDHGSCIPEADEKRNQVKKSNNLTTKAACNSCTVTGETVWVEGLVPGIDFCNHDLKPIATWEVDGTGLATGVPFSMYLILAAQSDLQNDQEISISYGNKGNEELLYLYGFVIDENIDDYVMVHYPAEAMNTISLSESKGQLLEVQNAEMRCLLHKTFLDNGFFPLGTQISGEDNKGKAEQVCNYSWSGQRKMPSYANKLVFPEKFMTTLRTIAMQEEELYKVSSMLEELAGPERERELSDTDVQSAVWEVCGDTGALQLLVDLLRVKMMNLEESSGTDEDDLDLLRKALITDDQEDSKQCTSNLSTKTDDSKEPKLMTRNKWSAIVYRRGQKQLTRLFLQEAEHALQLSLNEEEVTSC* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0745 562 CDD SET_LSMT 32 315 - -
Vra4g0745 562 PANTHER SET DOMAIN-CONTAINING PROTEIN 4 557 - -
Vra4g0745 562 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 557 - -
Vra4g0745 562 Gene3D set domain protein methyltransferase, domain 1 5 315 - -
Vra4g0745 562 SUPERFAMILY SET domain 8 319 IPR046341 -
Vra4g0745 562 Pfam SET domain 81 301 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0745 Vra-Chr4 13789079 13800457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0745 8 215 NAC Transcription Factor Family AT3G56570 27.230 4.10e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vra4g0745 SET 7.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0745 - - vun:114183365 1057.36