Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0665 ATGGATACTACTCTTTTCTCCATGAACAAACCAACCTTCAAAATTCGCTTTTTCTTATTCTTATGCTTCTTCATTGGGATAGTTTCATCCCAATTGTCCTCTGATTTTTACTCCACAACCTGTCCTAATGCACTTTCAACCATTAAGAGTGGAGTCGATTCTGCAGTTAGCAATGAAGCTCGTATGGGAGCATCCCTCCTACGTCTCCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCCTCAGTGCTATTAAACGATACATCAAGTTTCACAGGTGAACAATCAGCAGGACCCAACGTGAATTCCATAAGGGGTTTTGGTGTAATAGACAGCATTAAGTCTGAGTTGGAAAGCTTGTGCCCTGGTGTTGTTTCTTGTGCTGATATTCTCGCTGTAGCAGCAAGAGACTCAGTCGTTGCTCTTGGTGGACAAAGTTGGACAGTGCAACTGGGTAGAAGAGACTCAAGGACAGCAAATTTAGATGCTGCAAACTCAGACTTACCTGGTTTTACTTTCAGTCTACAGCAACTTATCGATTCTTTCTCAAAAAAAGATTTCACCACAGAAGAAATGGTTACCCTGTCAGGAGGGCACACAATTGGGCAAGCTAGTTGTTCAACTTTCAGAACAAGGATTTACAACGACACCAACATAGATTCCTCGTTTGCAACATCGTTGCAAGCAAATTGTCCTAGCGTTGGTGGTGACCGAAATTTGGCTCCTCTTGACAGCTCCCCGACCACCTTTGACAATGCTTACTTCCAAGATCTGCAGAGCCAAAAGGGTCTCTTGCACTCAGATCAAGAGCTTTTCAATGGAGGATCCACTGATTCTCAAGTAAATGGCTATGTCAGCAACCCTTCAAGTTTTCAAACTGATTTTGCCAATGCAATGGTGAAAATGGGGAACCTTGGTCCACTGCTCACTGGGTCAAGTGGCGAAATCAGGACCAACTGCTGGAAGACCAATTAA 975 0.4338 MDTTLFSMNKPTFKIRFFLFLCFFIGIVSSQLSSDFYSTTCPNALSTIKSGVDSAVSNEARMGASLLRLHFHDCFVQGCDASVLLNDTSSFTGEQSAGPNVNSIRGFGVIDSIKSELESLCPGVVSCADILAVAARDSVVALGGQSWTVQLGRRDSRTANLDAANSDLPGFTFSLQQLIDSFSKKDFTTEEMVTLSGGHTIGQASCSTFRTRIYNDTNIDSSFATSLQANCPSVGGDRNLAPLDSSPTTFDNAYFQDLQSQKGLLHSDQELFNGGSTDSQVNGYVSNPSSFQTDFANAMVKMGNLGPLLTGSSGEIRTNCWKTN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0665 324 Gene3D - 35 320 - -
Vra4g0665 324 PANTHER PEROXIDASE 17 324 - -
Vra4g0665 324 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 ProSiteProfiles Plant heme peroxidase family profile. 31 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 CDD secretory_peroxidase 31 323 IPR033905 GO:0004601|GO:0042744
Vra4g0665 324 SUPERFAMILY Heme-dependent peroxidases 31 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 Pfam Peroxidase 50 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Vra4g0665 324 Gene3D Peroxidase, domain 2 169 302 - -
Vra4g0665 324 PANTHER PEROXIDASE 72-RELATED 17 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra4g0665 324 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0665 Vra-Chr4 12343036 12344963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0665 27 324 Peroxidase AT5G05340 65.116 1.39e-141 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0665 K00430 - gmx:100815671 534.258