Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0652 ATGGGTAACAACAGGTTCAAATTATCAGACATGATCCCCAATGCCTGGTTCTACAAACTCAAGGACATGGGAAAAGCAAGAAAGCAAACCCCATCTCAGTCCAAGAAGAAAAAACAACCTTTACCAGCCTCAAGCGCACCATTATCAAAACCAAAACAACCCCACCAATTCAATCCCAGAAAGTCTTACTACTTCACAAGGGAGCTTAACCCAAATGATAGAATCTACAGCTCACCTGCAAATAACCAAAATGCCAAATGCAACAATTCCCCTGAAGCCCCCAGAAAATCATCCAAACAAAGACTCAAGAGAAGAACTGCAAGGACTTCTTCACCTAAGCTTGCTGTTGCCGCTAACAATGACAACTCCTCATCACCACATGATAGCTCTGCCGAATCAGAGTATCCTGACCCAGAATTCAGAACAGACCGTGTTCTTGCCACTGAAGCATTAGATCAAACGGTTTCTTGGTCCAACTCTTTAGCCTGCAAGGTACACTCCGACGCCAAGGACATCATCATTGAAGTAGACAACAATTCCACAGAAAGAAAAGACGATAAGCTAGAAGGGTATGAATATGATTCCTTCTCGGACCTCGTGCTTCCACCAATTGTGACCAAGCCTCCAAAATTCGATGACTTGCTGAGTGATGCCAAGAAGAAAGAAACCAAAATGGATGGAGCAGAAGAACCAAACCTGAAGGGACCGCTAAGAGTTAAAATTGTGAAGGAAGGCACTGCACCAATGAAGGAACATAAGAACACCCCTGGTAGGAGATTCTCTGTGAGCTCTTCTCCAGGGGTGAAGCTGCGGACGAACTCGCCGCGAATTGGCAGCCGGAAAACTCAGGCACATGGCCGGAGGAGTGTGTCGTCCGGCGCTGTCTCCGGGTCCCGGAGAAGCCTTTCGGATAGCTTTGCAATTGTGAAGTCATCACTGAATCCTCAAAGGGACTTCAGAGAATCAATGGTGGAGATGATTGTGCAGAACAACATAAGGACATCAAAGGATTTAGAGGATCTTCTTGCTTGCTATCTTTCTCTTAATTCAGATGAGTATCATGACCTCATTATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATTAG 1116 0.4471 MGNNRFKLSDMIPNAWFYKLKDMGKARKQTPSQSKKKKQPLPASSAPLSKPKQPHQFNPRKSYYFTRELNPNDRIYSSPANNQNAKCNNSPEAPRKSSKQRLKRRTARTSSPKLAVAANNDNSSSPHDSSAESEYPDPEFRTDRVLATEALDQTVSWSNSLACKVHSDAKDIIIEVDNNSTERKDDKLEGYEYDSFSDLVLPPIVTKPPKFDDLLSDAKKKETKMDGAEEPNLKGPLRVKIVKEGTAPMKEHKNTPGRRFSVSSSPGVKLRTNSPRIGSRKTQAHGRRSVSSGAVSGSRRSLSDSFAIVKSSLNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDN* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0652 371 MobiDBLite consensus disorder prediction 258 298 - -
Vra4g0652 371 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 371 IPR038933 GO:0045892
Vra4g0652 371 MobiDBLite consensus disorder prediction 249 298 - -
Vra4g0652 371 MobiDBLite consensus disorder prediction 23 139 - -
Vra4g0652 371 MobiDBLite consensus disorder prediction 49 95 - -
Vra4g0652 371 MobiDBLite consensus disorder prediction 112 131 - -
Vra4g0652 371 Pfam DNA-binding domain 1 40 IPR025830 GO:0003677
Vra4g0652 371 Pfam Transcriptional repressor, ovate 312 368 IPR006458 -
Vra4g0652 371 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 307 369 IPR006458 -
Vra4g0652 371 ProSiteProfiles OVATE domain profile. 308 367 IPR006458 -
Vra4g0652 371 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 4 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0652 Vra-Chr4 12107471 12110043 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vra4g0652 Ovate 2.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0652 - - gmx:100794572 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0652 4 12107471 12110043 Vra4g0652 4 12107471 12110043 ECH