Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0613 ATGCTAACCCTCAATATCAATGCTATTTCTTCTTCGTTCTCAATTGTTCCATTTCATGCCAATTATCCACTGTCTACTCAAACACAATTATTATTTCCTTCCAATCTTAGTTACTCCTTTGCTACTACAGCAACCAGAAAGTTCAAGTCTTTTCAGCTCAAGGCTGGATTTTGGGAATCAATTAAATCTGGGTTGATGAAAGATAACTCGATGCAAGTCATTGATCCACCCTCTATAGATGAAGAAGATGAAGAACCTCTGCCTCAAGTGTTTGTCCTTGTGGAAAAGACAGAACCTGATGGGACAATTGAACAAATAATATTCTCTTCAGGTGGAGATATTGATGTATATGATCTTGAAGCCCTCTGTGACAAGGTAGGGTGGCCACGTAGACCACTGTCAAAATTAGCTGCGGCTTTGAAAAATAGCTATATAGTGGCCTCACTTCATTCTATAAGAAAGTCGCCTGGGTCAGAGGGGGATGAACAGAAGAAATTAATTGGCATGGCCCGTGCTACGTCTGACCATGCCTTCAATGCCACAATTTGGGATGTTCTAGTTGATCCTAGTTACCAGGGCCAAGGTCTTGGTAAAGCTCTTATAGAGAAACTGATTAGAGCTCTTCTGCAAAGGGACATTGGCAATATAACTCTGTTTGCAGACAGTAAAGTTGTGGAATTTTATCGCAATTTAGGCTTTGAAGCAGACCCAGAGGGCATAAAAGGCATGTTTTGGTATCCGAATCACTAA 750 0.408 MLTLNINAISSSFSIVPFHANYPLSTQTQLLFPSNLSYSFATTATRKFKSFQLKAGFWESIKSGLMKDNSMQVIDPPSIDEEDEEPLPQVFVLVEKTEPDGTIEQIIFSSGGDIDVYDLEALCDKVGWPRRPLSKLAAALKNSYIVASLHSIRKSPGSEGDEQKKLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALIEKLIRALLQRDIGNITLFADSKVVEFYRNLGFEADPEGIKGMFWYPNH* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0613 249 Gene3D - 110 246 - -
Vra4g0613 249 Pfam Acetyltransferase (GNAT) family 116 233 IPR000182 GO:0016407
Vra4g0613 249 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 112 249 IPR000182 GO:0016407
Vra4g0613 249 PANTHER ACETYLTRANSFERASE NSI 6 248 - -
Vra4g0613 249 PANTHER ACYL-COA N-ACYLTRANSFERASE 6 248 IPR045039 GO:0008080
Vra4g0613 249 CDD NAT_SF 161 218 - -
Vra4g0613 249 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 115 238 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0613 Vra-Chr4 11583123 11587031 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra4g0613 Acetyltransf_1 1.4e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0613 K22450 - gmx:100799333 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0613 4 11583123 11587031 Vra4g0613 4 11583123 11587031 ECH