Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0569 ATGGCTTTCTCCGACTCTTCTTCTGGTCGCAACTCTCTCATCCCCTCCTTCCTATACTCCTCTTCCTCCAAGACGCTTCCTCTCCACCGTATGCTCCACTCCACCGCCGCCGCCGCCGCCGCCGCCTCACCCTCGTCACCGCCGGCAAACATCGATGCCGGATCGCGCGGCTTCATGATTCCCTCTCCCAGCGAGTCACGCAAGATCGAGCTTTATTCGCCTGCCTTCTACGCCGCCTGTACTGCCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATCGACCCTGCTAAGTACAAGAACATCACATCTGGATTTGGGGTTTTGCTTAAGGAGCAGGGCATCAGGGGCTTTTTCCGTGGTTGGGTGCCTACCTTGCTTGGTTACAGTGCACAGGGTGCTTGCAAATTCGGATTCTACGAGTTCTTTAAGAAGTATTACTCCGATATTGCTGGTCCAGAGTATGCTAGCAAGTACAAGACCTTGATTTACCTTGCTGGTTCCGCTTCTGCTGAGGTTATTGCTGATGTTGCTCTTTGCCCCTTCGAGGCTGTGAAGGTCCGTGTCCAAACACAGCCTGGTTTTGCCAGGGGTTTGGCTGATGGGCTCCCAAAATTTGTGAAATCTGAAGGAACTTTGGGGCTGTACAAGGGAATAGTGCCTCTGTGGGGACGACAGATTCCATACACAATGATGAAATTTGCTTCATTTGAGACCATAGTGGAGCTGATCTATAAGCATGCCATTCCTACTCCCAAGAATGAGTGCAGCAAAAACCTGCAACTCGGTGTCAGTTTTGCCGGTGGATATATTGCTGGTGTGCTTTGTGCAATCGTGTCTCATCCTGCTGATAATCTTGTCTCTTTCCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGCGGTGAGTAAGCTTGGTTTGTGGGGTCTCTTCACCCGTGGTCTTCCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCCCAATGGGGAATATATGATGCTTTCAAAGTCTTTGTTGGGCTGCCAACAACTGGTGGTCCTGCTCCTGCCGCTGCTCCAGCTCCAGCAAAGGCGTAA 1119 0.5139 MAFSDSSSGRNSLIPSFLYSSSSKTLPLHRMLHSTAAAAAAASPSSPPANIDAGSRGFMIPSPSESRKIELYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKNITSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKNLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVSKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAPAKA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0569 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Vra4g0569 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 368 IPR044677 GO:0005315|GO:1990547
Vra4g0569 372 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 368 - -
Vra4g0569 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Vra4g0569 372 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
Vra4g0569 372 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Vra4g0569 372 Pfam Mitochondrial carrier protein 174 260 IPR018108 -
Vra4g0569 372 Gene3D Mitochondrial carrier domain 75 353 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0569 Vra-Chr4 10852290 10855341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0569 7 372 Chloroplast and Mitochondria Gene Families AT5G14040 77.540 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0569 K15102 - gmx:548006 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0569 4 10852290 10855341 Vra4g0569 4 10852290 10855341 ECH