Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0503 ATGGATCTGGAGTCTGTGATCTACAAAAACTCTTTTAAGGATGGATCATGGAAGACAGTGTTAACATTGGCTTATCAGAGCTTAGGAGTTGTGTATGGCGATTTAAGTACATCCCCACTTTATGTTTACAAAAGCACTTTTGCTGAGGACATTCAGCATTCAGAGACCAATGAAGAGATATATGGAGTGTTGTCTTTTGTGTTCTGGACTCTCACACTGGTTCCACTCCTCAAGTATGTCTTCATTGTGCTCAGAGCAGATGACAATGGAGAAGGAGGGACTTTTGCTCTGTACTCTCTTCTATGCAGGCATGCTCAGGTGGGTTTGTTGCCTAATGTTCAGCTTGCAGACGAAGAACTAACTGAGTACACCAAGGATGGAACAGTGCCAATTGATAAGAAGAATGTTGGGTTGGAGTTGAAATCGGTGTTCGAGAAACACAAGGTTCTGCAGAGGGTGCTGCTTGTTCTGGCTCTGATAGGGACTTGCATGGTTATTGGGGATGGTGTGCTTACACCTGCAATTTCTGTTTTCTCTGCCGTGTCAGGGTTGGAGCTTTCTATGTCTAAAGAACAGCATAGATATGTTGAAGTACCAATTGCTTGTGTGATACTGATATTTTTGTTTGCACTTCAACATTATGGAACACATCGCGTGGGGTTTCTATTTGCTCCTGTTGTGTTGACCTGGCTACTATGCATTAGCTGTATCGGTATGTATAATATCATACATTGGAACCCTCATGTTTATGAGGCTCTCTCTCCCTACTACATGTTCAAATTTCTGAAGAAGACTCAAAGAGGAGGTTGGATGTCCTTAGGGGGAATTCTACTGTGTATAACAGGTTCTGAAGCCATGTTTGCTGATCTAGGACACTTTTCACAGTTGTCGATTAAGATTGCTTTTACCTTTCTGGTATACCCTTCTCTAATTCTGGCATATATGGGACAAGCTGCATATCTTTCCAAGCATCATACTATTGAAAGTGATTACCGAATTGGGTTCTACGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGCAATAGCTATACTTCAAGCTGTGGTTGGAAGTCAAGCTATCATCACAGGTACTTTCTCAATAATCAAACAATGTTCTGCAATGGGATGCTTCCCCAAAGTTAAGATCATTCATACATCATCAAAGGTACACGGCCAGATTTACATCCCAGAGATCAACTGGTGTTTGATGCTACTTTGCCTTGCTATTACTGTTGGTTTTAGAGATACAAAACGCATGGGAAACGCATCAGGCTTGGCTGTCATAACTGTGATGCTGGTTACCACATGCTTAATGTCTCTAGTTATTGTTTTATGCTGGCACAAGAGTATTTTCCTAGCCATTTGTTTCATATTTTTCTTTGGGTCAATCGAAGCACTATACTTCTCTGCATCCCTGATCAAGTTCCTTGAAGGAGCATGGGTGCCCATTGCCCTCTCACTCATATTTCTTATCGTGATGTATGTGTGGCACTATGGCACACTTAAAAAGTACGAGTTTGATGTTCAGAATAAGGTGTCCATCAACTGGCTCCTTGGTTTAGGCCCCACTCTAGGAATTGTGCGTGTCAGAGGAATTGGCCTAATACACACTGAACTTGTGTCTGGGATCCCAGCCATTTTCTCTCACTTTGTCACCAATCTTCCAGCTTTTCATCAAGTAGTGATCTTCCTCTGCGTCAAATCTGTCCCAGTGCCACATGTGAGACCTGAAGAAAGGTTCTTGGTTGGTAGAGTTGGCCCAAAAGAATACAGGTTGTATAGGTGCATAGCTCGGTATGGTTATAGGGACTTTCACAAGGATGATATTGAGTTTGAAAAAGATCTTATTTGTAGCATAGCAGAATTCATTCGGTCAGATACTTCTGAGTCCAACCAAGGATTTGCGAGTTTTGAAGATGACACAAAAATGGCAGTTGTAGGCACTTCAGCATCAAACTCAGAAGGTATAAGGATGTGTGAAGATGATAACAACAATTCTCAGATGGAAGATTGCTTAGAAATGAGTGTGGTTAAGTCTCCTGAAATAGTTAGGAAGAGAGTGAGGTTTGTTGTGCCAGACAGTCCAGAGATTGATTTGGGTGTAAGGGAGGAGTTGCAGGAACTAATGCAAGCAAGGGAAGGAGGAATGGCATTCATAATGGGTCACTCTTATGTGAAAGCAAAGAGAGGTTCAAGTTGGATAAAGAAAGTTGTGATCAATTATGGGTATGATTTCTTAAGGAGAAATTCTAGAGGACCAACTTATGCTCTAAGTATCCCTCATGCTTCTATCCTAGAAGTTGGCATGGTCTACCATGTCTGA 2328 0.4171 MDLESVIYKNSFKDGSWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHAQVGLLPNVQLADEELTEYTKDGTVPIDKKNVGLELKSVFEKHKVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPIACVILIFLFALQHYGTHRVGFLFAPVVLTWLLCISCIGMYNIIHWNPHVYEALSPYYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHTIESDYRIGFYVSVPEKIRWPVLAIAILQAVVGSQAIITGTFSIIKQCSAMGCFPKVKIIHTSSKVHGQIYIPEINWCLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWHKSIFLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSLIFLIVMYVWHYGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDFHKDDIEFEKDLICSIAEFIRSDTSESNQGFASFEDDTKMAVVGTSASNSEGIRMCEDDNNNSQMEDCLEMSVVKSPEIVRKRVRFVVPDSPEIDLGVREELQELMQAREGGMAFIMGHSYVKAKRGSSWIKKVVINYGYDFLRRNSRGPTYALSIPHASILEVGMVYHV* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0503 775 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra4g0503 775 PANTHER POTASSIUM TRANSPORTER 6 1 775 - -
Vra4g0503 775 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra4g0503 775 TIGRFAM kup: potassium uptake protein 23 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0503 Vra-Chr4 9263333 9269643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0503 1 773 Inorganic Solute Cotransporters AT5G14880 76.893 0.0 1223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0503 K03549 - gmx:100793387 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0503 4 9263333 9269643 Vra4g0503 4 9263333 9269643 ECH