Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0498 ATGAGAGAGAGGTATTGTTACAAGGAAGTGCTTCCATTCACTGCAATGGTTGCCATAGAGTGCTCCAACGTTGGTGTGAACATTCTATTCAAAGCTGCAACTCAGAAGGGATTGAGTTATTATGCCTTCATCGCTTATTCATATCTCATCTCTGTTCTCTTTCTCCTTTTGCCTTTGCCCTTCGTCTTTCGATGGTCAAGAGGCCTTCCACCGCTCAACCTCTCTCTCATCTCAAGAATTTTCCTCCTTGGAGTAATTGGAGTGATAGCTCAACTTTCTGGGTACAAGGGACTGAATTACACCTCGCCTACGCTTGCGTCTGCTCTCAGCAACCTCATACCAGCTTTCACCTTCATATTGGCGATCATTTTCAGGATGGAAAAGGTAGCTTTGAGAAGCTCAAGCACTCAGGCCAAAATCCTGGGTTCATCCGTATCCATATTAGGTGCACTCATAGTTTTACTCTATAAGGGTTCCATAATCCTTTCAACTTCATCTGCAACACTATCTCATACGCTTCTTTCTCCAATGGAATCTACATCACAAACAAATTGGGTTCTTGGTGGATCCCTACTTGCCATTGAGTATCTTTTGGTTCCAATCTGGTACATTGTTCAGACCGATATTATGAAACAATACCCAGCAGAGTTGATTGTGGTGTTCCTGTACAACCTGAGCGGGACTCTGATATCTGCTCCAATTTGCTTACTGTTAGAAGAAAATTTGAGTGCTTGGAAGATAAATCCTGATGTAACATTGATGGCTATTGTATATTCGGGTTTCTTTTGCACAGGCCTAAGTAGTTTGGTTCACACTTGGGGCATTCATCTTAAAGGCCCAGTTTATGTTTCAATCTTTAAGCCTCTGTCCATTGTGGTTGCAGCCGTTTCGAGTGTCATCTTCCTTGGTGATGCTCTGTATTCTGGAACTGTTGTTGGAGCAGTGATACTCTCGTTTGGATTTTATGCTGTGATATGGGGTAATGCAAAACAAGATGAATTGAGTGAGGACTTTGACATGCGTCCTTCATCAAGTAGTAAGAGTCCTTTGTTGCTGAGCTACAAAGGGAAAGATAACGAAGAGACCACCCACTGTTGA 1098 0.4271 MRERYCYKEVLPFTAMVAIECSNVGVNILFKAATQKGLSYYAFIAYSYLISVLFLLLPLPFVFRWSRGLPPLNLSLISRIFLLGVIGVIAQLSGYKGLNYTSPTLASALSNLIPAFTFILAIIFRMEKVALRSSSTQAKILGSSVSILGALIVLLYKGSIILSTSSATLSHTLLSPMESTSQTNWVLGGSLLAIEYLLVPIWYIVQTDIMKQYPAELIVVFLYNLSGTLISAPICLLLEENLSAWKINPDVTLMAIVYSGFFCTGLSSLVHTWGIHLKGPVYVSIFKPLSIVVAAVSSVIFLGDALYSGTVVGAVILSFGFYAVIWGNAKQDELSEDFDMRPSSSSKSPLLLSYKGKDNEETTHC* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0498 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 330 - -
Vra4g0498 365 MobiDBLite consensus disorder prediction 337 365 - -
Vra4g0498 365 Pfam EamA-like transporter family 201 325 IPR000620 GO:0016020|GO:0016021
Vra4g0498 365 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
Vra4g0498 365 PANTHER WAT1-RELATED PROTEIN 10 333 - -
Vra4g0498 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Vra4g0498 365 PANTHER WAT1-RELATED PROTEIN 10 333 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0498 Vra-Chr4 9177580 9183036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0498 1 359 Nodulin-like Gene Family AT5G40240 52.033 7.98e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0498 - - gmx:100805667 545.814