Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0480 ATGGGTAAGATTGAACTGGTAGAGAAAATTGTAGTTGTTCCTGAGCAACCTACACCACGCAAGAGAATGTTCTTGTCAAATATTGATCTGTCCCTTGTTGTTTACCAAGATTCTGCCTCCTTTTTTGACCCTCCAACCACCCAAATGAGTTTCAGTGAGATTTGTAACAAATTATACAGTGCACTTGGTAAAATGCTTGTGCAGTATGATTTTATGGCTGGCAGACTAGTGCCGAGTTTGGAAGAGACTCACAGATTTGAAATTGACTGCAATGGTGCTGGCATTGTGATTGCAGCTGCAAGAACTGACAGAAAATTGAGTGAATTTGGTGTGATTTCTGCACCTAATCCAGAGTTGAGGGAATTAGTTGTTTTTCTGCATGAAGGGTGTGACCAAGAAACTGATCTGAAAGAAAAACCCCTTGCATCCTTACAGCTGACTCAGTTTGGTTGTGGAAGTTTGGCACTTGCTTCTCACTACAATCACTGCACTTTGGACGGTTTTGCAATAAGAGATTTTGAGGTAAACTTAGGGGCATTAACACGTGGTGAGGATCTCATCACAGTACCTAATGCTGATAGAACACTGCTGAGAGCAAGAAATCCTCCAATTGTAAGCCATCCACATTTTGAGTACTCAAAATCTACTGTGACACACAACTTGTTTACTCTCCGAGGAAAAAGTGGTACAAATGTCATGCAATCCCTGCCAGAAAACCTGATTCATGTGCTTCATTTGTCACCACAAAGCATTGCTAGCTTAAAAAAGAAAGCCCTGGAGGAGGACAAAACCTTAAAGAACACAACCACTTTTCAGGTTGTTGCTGCCAAAATATGGAAGGCAAGAAGCATTGCAACAAGGATGTCGGAGGAAAAAGTGTCCACAATGCTGTTTCCAGTGGATGTGAGGAAAAGGGTTGTTCCTGAACTCCCAGATGGGTTTGCAGGAAATGCATTGGTCCCTGGTTTTGCAAGAGCAACTGTGAGGGAGCTGAAGGAGCTAGAAGATGCATGTCACATAAGGAAGGTGCAAGAAGGGCTTGAAAGGTTGAATGATGAGTACATTAAGTCAGGGATAGATTGGTTAGAAGTGAACAAAGGAGCACCTTGTATGGAAGATAGTTTCTCCTTGGTGGCATGGTGGAGATTGGGGTTAGAGGAACAACTTTTTGCATGGGGTAGACTCAAGTGTGCTACTCCACTAGAAGTTAAACCTGGTTTGGTCATGCTATTGCCAGGGCCACAAGATCAAGGAGGCATTAACATATGCCTTGATTTACCTGAGGATCAAATGCAAGACTTTAGTAGGATAATGCTACAAATTTAG 1326 0.4246 MGKIELVEKIVVVPEQPTPRKRMFLSNIDLSLVVYQDSASFFDPPTTQMSFSEICNKLYSALGKMLVQYDFMAGRLVPSLEETHRFEIDCNGAGIVIAAARTDRKLSEFGVISAPNPELRELVVFLHEGCDQETDLKEKPLASLQLTQFGCGSLALASHYNHCTLDGFAIRDFEVNLGALTRGEDLITVPNADRTLLRARNPPIVSHPHFEYSKSTVTHNLFTLRGKSGTNVMQSLPENLIHVLHLSPQSIASLKKKALEEDKTLKNTTTFQVVAAKIWKARSIATRMSEEKVSTMLFPVDVRKRVVPELPDGFAGNALVPGFARATVRELKELEDACHIRKVQEGLERLNDEYIKSGIDWLEVNKGAPCMEDSFSLVAWWRLGLEEQLFAWGRLKCATPLEVKPGLVMLLPGPQDQGGINICLDLPEDQMQDFSRIMLQI* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0480 441 Gene3D - 2 214 IPR023213 -
Vra4g0480 441 Pfam Transferase family 3 435 - -
Vra4g0480 441 Gene3D - 229 441 IPR023213 -
Vra4g0480 441 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 439 - -
Vra4g0480 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0480 Vra-Chr4 8624022 8626283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0480 3 441 Monolignol Biosynthesis Gene Families AT5G48930 28.508 1.46e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0480 K15400 K13065 gmx:100801822 788.489