Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0432 ATGGGTTTCTCAATCTCACTCTTTTTCCTTCTCTTGGCTCTTTCTTTTCAATCTTCATCTTCACTCTCCTCGTTGAACAAGGGGTCCTCTCTCTCTGTGGAGAAACAAGCGCAACGCTTTATTCTCTCACCTAATCAAATGTTCTGTGCTGGTTTCTTTCAAGTTGGCGAAAATGCCTTCTCCTTTGCCATATGGTTCAACGACCCTCACACTCACAACCCCACCAATGTGGTTTGGATGGCAAACCGTGATCAACCCGTAAATGGGAAGCTCTCAAAGCTTTCTCTTTTGAACAGTGGTAACATCGTCTTGGTTGATGCTGGTCAAATCACCACTTGGTCATCAAACACAGCATCAGATGCCCTAGTAAAGTTGCATCTCCAAGATGATGGTAATCTTGTGCTAGATGAGCCCCAAGGAACCATTTTGTGGCAAAGTTTTGATTTTCCAACGGATACTCTGCTTCCTGGTCAACCTCTTACCAGATTCACACAACTTGTGTCTTCAAGAAGCTTCACAAATCATTCCTCTGGCTTCTATTACCTGCTATTTGACGATAACAATATTCTTAGTCTCATTTATGATGGCCCTGATGTTTCAAGCACATACTGGCCTCCCCCTTGGCTACTCAGTTGGCAAGCTGGAAGATTTAATTACAATAGCAGCAGAGTTGCAGTGTTCAATTCTCTTGGCAGTTTCATTTCATCAGATAATTATGCTTTTTCCACCTATGATCACGGCACGGTTATGCCCAGAAGATTAACACTGGACTCTGATGGTAACGTTCGTATGTACTCTAGAAATGAGGCTTTGAAGAAATGGTATGTTTCCTGGCAATTCATATTTGATACTTGCGGCATTCATGGGATTTGTGGAGCTAACAGCACTTGCAGCTTTGATCCTGAAAGGGGAAGGAGATGTTCGTGTTTACCGGGATACAGAGTGAAGAACCGTGGTGATTGGTCTTACGGGTGTGAACCCTTGTTTGATGTTACTTGCAATGGAAATGAGTCTACCTTTTTAGAGATACAGGGCGTTGAGTTATACGGCTATGATCGTAATTTTAGCCAAAACAGTACGTACATGAACTGTTTGAATTTATGCTTGCAAGATTGTAACTGCAAAGGTTTTCAGTATAGATATGATGAGGGGCAAGGATTTAGCTGCTACACAAAGTTACAGTTGAGGAATGGAAGGCATTCACCAGGATATAATGGAACAATTTCGCTGAGACTGCCAAAAGGAAATAACTTCTCCAAGGTGGAATCTGTGAGAGCAGAAGATCATGTTTGTTTGGTGCAGCTTCAAAGGGGCTATGTAACAAAACCAGAAAATCGTTATGTGAGATTCTTTTTGTGGTTTGCTACAGCAGTTGGAGCTTTAGAATTGATTTGCCTTTCCCTGGTTTGGGGTTTCTTGATGAGGACGCGCCAAAAGTCTAGTACAGATCAACAAGGGTACCATGTTGCTGCAGTGGGAGTCAGAAAATATAGTTATTCAGAGTTGAAGAAGGCGACAAAGGGGTTCAGTGAAGAGATCGGAAGGGGNGCGGGAGGGGTTGTGTACAAAGGTATTTTATCAGATGAAAGACATGCAGCAATTAAGANNCTGAATGAAGCTNAACAAGGAGAAGGAGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGATTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCACAAAATCTCTCGTCCAACACTCTTGATTGGAGTAAGAGATACAACATTGCCCTTGGAACTGCAAGAGTTCTGGCATATCTTCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAGAACATACTTCTTGACGGTAATTATGAAGCCAAGGTAGCAGATTTTGGGCTGTCGAAGCTAGTGAACAGGAACAACCTGAATAACAAGAGTTCAAGGTTTTCAATGATAAGAGGAACAAGAGGGTACATGGCACCTGAGTGGGTTTACAATTTACCAATAACTTCGAAAGTGGATGTTTACAGCTACGGAATTGTTCTTCTGGAAATGGTAACTGGAAAAAGTCCAACAATTGGCGTTGAAAGCATTGATGGAGAAGAATCATATAATGGAAGGTTGGTAACATGGGTGAAAGAGAAAAGGAGTGGCACCTACTCCTCTTGGCTGGAACAAATCATTGATCCTGCAATTGAAACAAACTACAATAAATTTAAGATGGACCTTTTGGTTAGAGTGGCTTTGGCTTGTGTTGAGGAAAGTAAAGATTTGAGACCCACCATGAGTCAAGTTGTCGAAATGCTTCAAAACCATGAAAGTAACACTAAGTCTTAA 2382 0.4169 MGFSISLFFLLLALSFQSSSSLSSLNKGSSLSVEKQAQRFILSPNQMFCAGFFQVGENAFSFAIWFNDPHTHNPTNVVWMANRDQPVNGKLSKLSLLNSGNIVLVDAGQITTWSSNTASDALVKLHLQDDGNLVLDEPQGTILWQSFDFPTDTLLPGQPLTRFTQLVSSRSFTNHSSGFYYLLFDDNNILSLIYDGPDVSSTYWPPPWLLSWQAGRFNYNSSRVAVFNSLGSFISSDNYAFSTYDHGTVMPRRLTLDSDGNVRMYSRNEALKKWYVSWQFIFDTCGIHGICGANSTCSFDPERGRRCSCLPGYRVKNRGDWSYGCEPLFDVTCNGNESTFLEIQGVELYGYDRNFSQNSTYMNCLNLCLQDCNCKGFQYRYDEGQGFSCYTKLQLRNGRHSPGYNGTISLRLPKGNNFSKVESVRAEDHVCLVQLQRGYVTKPENRYVRFFLWFATAVGALELICLSLVWGFLMRTRQKSSTDQQGYHVAAVGVRKYSYSELKKATKGFSEEIGRGAGGVVYKGILSDERHAAIKXLNEAXQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAQNLSSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDGNYEAKVADFGLSKLVNRNNLNNKSSRFSMIRGTRGYMAPEWVYNLPITSKVDVYSYGIVLLEMVTGKSPTIGVESIDGEESYNGRLVTWVKEKRSGTYSSWLEQIIDPAIETNYNKFKMDLLVRVALACVEESKDLRPTMSQVVEMLQNHESNTKS* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0432 793 Gene3D - 18 149 IPR036426 -
Vra4g0432 793 Gene3D Transferase(Phosphotransferase) domain 1 582 793 - -
Vra4g0432 793 ProSiteProfiles Protein kinase domain profile. 507 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra4g0432 793 SMART blect_4 32 150 IPR001480 -
Vra4g0432 793 Pfam D-mannose binding lectin 77 163 IPR001480 -
Vra4g0432 793 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 789 - -
Vra4g0432 793 Pfam S-locus glycoprotein domain 212 316 IPR000858 GO:0048544
Vra4g0432 793 Pfam Protein kinase domain 510 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra4g0432 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 193 IPR036426 -
Vra4g0432 793 PIRSF SRK 1 793 IPR024171 GO:0004674
Vra4g0432 793 ProSiteProfiles PAN/Apple domain profile. 333 415 IPR003609 -
Vra4g0432 793 Gene3D - 150 275 IPR036426 -
Vra4g0432 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Vra4g0432 793 CDD PAN_AP_plant 329 413 - -
Vra4g0432 793 SMART serkin_6 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra4g0432 793 SUPERFAMILY Protein kinase-like (PK-like) 483 784 IPR011009 -
Vra4g0432 793 CDD STKc_IRAK 513 786 - -
Vra4g0432 793 CDD B_lectin 39 150 IPR001480 -
Vra4g0432 793 Gene3D Phosphorylase Kinase; domain 1 471 581 - -
Vra4g0432 793 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 789 - -
Vra4g0432 793 ProSiteProfiles Bulb-type lectin domain profile. 16 148 IPR001480 -
Vra4g0432 793 ProSiteProfiles EGF-like domain profile. 281 319 IPR000742 -
Vra4g0432 793 Pfam PAN-like domain 333 392 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0432 Vra-Chr4 7345840 7348502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0432 497 791 Trihelix Transcription Factor Family AT5G38560 43.046 2.41e-67 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vra4g0432 Pkinase 4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0432 - - gmx:100785351 1288.09