Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0419 ATGGCGGAAGAACACCGATGCCAGGCACCACGCTTGTGCGTCAACAATTGCGGTTTCTTTGGCAGCCCTGCCACGCAGAATCTGTGCTCCAAGTGTTACCGCGATTTGCAACTCAATGAGCAGCAATCTTCCAACGCGAAGATGGTTCTGAATCAGTCTCTCGTTCTTCCGGCGCCTCCGGCGCCGGTTTCTGAACCGTCTTCTTCGAAGACGGCGGATCCGGCTTCTGCTGTGGTTGAGGAAGTGCCACGCGCGACGGAAGAGGCTAAGGCGCCGCAGCAGAACCGCTGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGCGGGATGATGCTTTGCGGGACGCACCGTTACCCGGAGCAGCACGCGTGCGAGTTCGATTTCAAGGGGATGGGGAGGGACCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGCGAGAAGCTCGAGAAGATCTGA 471 0.5966 MAEEHRCQAPRLCVNNCGFFGSPATQNLCSKCYRDLQLNEQQSSNAKMVLNQSLVLPAPPAPVSEPSSSKTADPASAVVEEVPRATEEAKAPQQNRCMTCRRRVGLTGFKCRCGMMLCGTHRYPEQHACEFDFKGMGRDQIAKANPVVKGEKLEKI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0419 156 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Vra4g0419 156 SUPERFAMILY AN1-like Zinc finger 83 151 IPR035896 -
Vra4g0419 156 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 156 - -
Vra4g0419 156 Pfam AN1-like Zinc finger 97 133 IPR000058 GO:0008270
Vra4g0419 156 Gene3D - 1 54 - -
Vra4g0419 156 SMART AN1_Zf_4 97 134 IPR000058 GO:0008270
Vra4g0419 156 ProSiteProfiles Zinc finger AN1-type profile. 91 137 IPR000058 GO:0008270
Vra4g0419 156 MobiDBLite consensus disorder prediction 58 91 - -
Vra4g0419 156 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Vra4g0419 156 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 156 - -
Vra4g0419 156 Gene3D - 67 152 IPR035896 -
Vra4g0419 156 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Vra4g0419 156 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0419 Vra-Chr4 7113611 7114704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0419 1 156 C2H2 Transcription Factor Family AT3G52800 50.877 6.51e-49 153