Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0378 ATGGCGTTATCTTGGCCACACGTGCTGCAGTTTCGTTCTCAATCTTCTCTCGGACACGCTAACTTCGTCTTCTTCTCCGATCTCACCGAATCCCGTTCTGTGGAACTGTCGTTCACTGGTTCCCTCACTCTGCTTCGTCGGTGCAAGATCTCCTGTCAGTCTCCGACGGCGCTGAAACCGGTGAAATGTCTTAGCAGATCCACGGAGGAGAAGCAGAGCGACACCGAAACTACTCTGTCCGACTCCGAGGAAGTTGTCGATGAACCAGATGACGGGAACCGAACTTCCGTTCTGGCAAACGGTCGTGTTGGTTCGCAGAGGATTGTCACCACGTTTTCAGGCGATTCTCTTTCTCTCGGAGTTCGAGAACCGGTTTATGAAGTCGTTGAAGTGAAGTCTAATGGGAAAGTGTCAACTAGAAAAATCAACAGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCTCGGGACATTCGAAGTGTGGATCCTTCATTGTTTATGACAAATTCAATGCCTGCTTTGCTGGTCCGGGAGTATGCTATACTTCTAAATCTGGGTTCATTACGAGCAATAGCGATGCAAGATTGTGTACTTATATTTGACAATAATGGCATAGGGGGGAAAGCTTTTCTAGAGACATTGCTGCCTCGATTGAACCCCAAGAACAGCAATGGAGGACCATCGATGCCATTTGAAATTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGACTGGAGCAGAGATTGATGGAATTAGAACCTCGTGTACAAGCCCTTCTCGAGGCCTTGCCAAATAGGTTAACTGGTGACATATTGGAGCAGCTTCGTACTAGCAAACAAACTTTGGTTGAGTTAGGTTCCAAGGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTTTGGAGGATCCTCATGAAATACGCCGTATATGCATCATGGGAAGAAACTGCACACTTAATAAAGGAAACAATAATATGGAATGCTCAGTGCCTTTTGAAAAGCAGAATGCTGAGGAGGAGGAGGAGGAAATTGAAATGCTTTTGGAAAATTATCTTCAAAGATGTGAATCCTGTCATGGTCAAGCTGAAAGACTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAATTTGAGTTCACGAAGACTTGAGGTTAGCAGAGTAGAACTCCTTCTGCAGGTTGGAACATTTTGTGTGGCAGTGGGTGCCCTTGTAGCAGGTATATTCGGCATGAACCTGAAGTCCTATCTTGAGGAGCATGTGTTGGCATTTTGGCTGACAACAGCGGGGATAATTGTTGGTGGAATTATTGCTTTCTTTCTGATGTATTCCTACCTCAGGGCGAGAAAAATATTTTGA 1368 0.4547 MALSWPHVLQFRSQSSLGHANFVFFSDLTESRSVELSFTGSLTLLRRCKISCQSPTALKPVKCLSRSTEEKQSDTETTLSDSEEVVDEPDDGNRTSVLANGRVGSQRIVTTFSGDSLSLGVREPVYEVVEVKSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDNNGIGGKAFLETLLPRLNPKNSNGGPSMPFEIEVVEAALLSRIQRLEQRLMELEPRVQALLEALPNRLTGDILEQLRTSKQTLVELGSKAGALRQMLLDLLEDPHEIRRICIMGRNCTLNKGNNNMECSVPFEKQNAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVLAFWLTTAGIIVGGIIAFFLMYSYLRARKIF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0378 455 Coils Coil 331 355 - -
Vra4g0378 455 Coils Coil 244 264 - -
Vra4g0378 455 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 58 454 IPR039204 -
Vra4g0378 455 MobiDBLite consensus disorder prediction 64 98 - -
Vra4g0378 455 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 58 454 - -
Vra4g0378 455 CDD Mrs2_Mfm1p-like 128 454 IPR039204 -
Vra4g0378 455 Pfam CorA-like Mg2+ transporter protein 335 444 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vra4g0378 455 Gene3D - 121 202 - -
Vra4g0378 455 MobiDBLite consensus disorder prediction 64 78 - -
Vra4g0378 455 Gene3D Magnesium transport protein CorA, transmembrane region 205 386 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0378 119 455 MRS2 Gene Family AT5G22830 82.789 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0378 K16075 - gmx:100808371 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0378 4 6674092 6686937 Vra4g0378 4 6674092 6686937 ECH