Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0353 ATGGAGAGAAGATGGTTAATAATTACGTATCCGACACGACCAGCGAAAAGGGACGTTGCATGGTATGAAAAGTCCTGTAACACTGCACCCACATGCGCTGTCTCCCCTTCACCCAATCTAACACTCTTCACGTTTTCTCAATCTTCATCTTCAGCTACCGTCCAAATAACCTTATCTATATATAACATGCTTCAAACACTCCAACAACATCAAGCATCAAGTTATTACATTGTTAACAACCAACAAACACTTGTAAACATGGCCAAGCTCAGTGTAAGAAGCAGCAAGAGAATTGTCAAGTTCAAATTCGTGGAGAAGCTCCAGAAGAGACTCTTACCAGGGAGAAGCAAAGAAGCTTCTGTTTCAAACTCAACTTATGTTCCAGAGGACGTGAAGGAAGGACACTTCGCTGTGATTGCTGAGGGTGGAGAAGAACACAAGAGGTTTGTGCTGCCACTCACTTGTTTATCCAACCCTAAGTTTTTGAAGCTGTTGGAGCAAGCAGAAGAAGAGTATGGCTTTGATCATGAAGGTGCTGTCACCATTCCTTGCAGGCCCAGTGATCTTGAGAGGATACTGGCTCACCAATGGCATCATCAACCAACTCAAACTTCTTCTCCTTACAGAAAATCCATCGTTTTTTAA 645 0.4295 MERRWLIITYPTRPAKRDVAWYEKSCNTAPTCAVSPSPNLTLFTFSQSSSSATVQITLSIYNMLQTLQQHQASSYYIVNNQQTLVNMAKLSVRSSKRIVKFKFVEKLQKRLLPGRSKEASVSNSTYVPEDVKEGHFAVIAEGGEEHKRFVLPLTCLSNPKFLKLLEQAEEEYGFDHEGAVTIPCRPSDLERILAHQWHHQPTQTSSPYRKSIVF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0353 214 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 104 201 - -
Vra4g0353 214 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 104 201 IPR003676 GO:0009733
Vra4g0353 214 Pfam Auxin responsive protein 109 194 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0353 Vra-Chr4 6366454 6367285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0353 107 206 Calmodulin-binding Proteins AT3G43120 41.748 6.58e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0353 - K14488 gmx:102668167 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0353 4 6366454 6367285 Vra4g0353 4 6366454 6367285 ECH
Vra4g0353 4 6366454 6367285 Vra2g0761 2 6749259 6749999 PCT