Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0304 ATGGAAGGAAGAAGCTTGGAGAATACTCCGACTTGGGCTGTGGCCGTTGTTTGCTTCGTTTTGCTCTCGGTATCTATCATCATCGAATACATCTTCAATATAATAGGAAAGTGGTTGAAGAACAAGCACAAAAGAGCGCTGCATGAGTCACTTGAAAAGATCAAATCAGAACTTATGTTATTGGGGTTCATATCGCTGCTTCTAACGGTAGGACAAAGTGTAATATCGAGGATATGTATATCAGAAAAGGTCGCCGGAACATTCCACCCCTGCACTCACCAAAGCGACCACAAAACCGATGCCCGGATATTACTATCGGAGCTTTTCGGTTCCGATCATGGCCAAAATCAACGCCGTATTTTGGCTGCCGGAGGAACTGACAAGTGCGCGGCTCAGGGTAAAGTTCCGTTTGTCTCATCAGAGGGCATTCATCAACTTCATATATTTATCTTCGTGCTGGCTGTTTTTCACGTTCTTTACTGCATTCTCACTCTGGCTCTTGGTAGAGCAAAGATGAGAAGATGGAAACGATGGGAAGAAGAAACAAAAACAACACAGTATCAATTTTCACACGATCCAGAACGGTTTAGATTTGCAAGAGAAACATCGTTCGGAAGAAGACACTTGAGTTTCTGGACTCAAAATACTGTCCTTGTTTGGATTATTTGTTTCTTCAGGCAGTTCGTACGCTCAGTTCCTAAAGTTGATTACTTGACCTTGAGGCATGGATTTATGATGGCACATTTGGGGCCTCAAAGTCGCCACAAATTTGACTTTCGGCAATATATTAAAAGAACTTTGGAAGAAGACTTCAAAGTGGTGGTTGAAATCAGTCCTCCAATATGGTTCATCACAGTGCTTTTTCTCCTGTTTCACACACATGGCTGGTACTCTTATCTGTGGCTGCCATTTGCTCCTTTGATCATTGTTCTATTAGTGGGAACTAAGCTGCAAGTGATAATAACGAAAATGGGTCAAAGAATTCAAGAACGTGGAGAGGTCGTAAAGGGTGTGCCACTGGTTCAACCTGGGGATGATCTCTTCTGGTTTAACAAACCTCGACTCATTCTCTACCTCGTCAATTTCGTGCTCTTTCAGCAGAACTCTTTCCAACTCGCCTACTTTTCATGGACTGCGCTTCAGTTTGGGATGAAATCTTGTTTCCATTCGCAGACGGAGGATGTGGTGATCAAAATCTCAATGGGGGTTTTCGTTCAATTCCTCTGCAGCTACGTAACTCTTCCTCTCTATGCTCTCGTCACACAGATGGGTTCGACCATGAAGCCAACCATATTCAACGAACGAGTAGCCATGGCTCTGAGGAATTGGCACCACGGAGCCAAGAAACACGTAAAGCAACAGAACCGTAGATCACAGTCGCAGGCCCCTTTGTCAGGGCCCACAACCCCCGATCATTCTATGTCTCAGGCCCATCTCTTACGCCGTTGGCACAGTGAAATGGACACCTATCCCACTGACTCTGAAGCCCATCGTCCCTGTGAGATCGATTTAGGCCCATCATCCAAGGTGCATCATCAGGAAATGGAAATGGATCAGCTGGACCATGGCCCACCACAAAATGTCAATGACCAGACTCAACACGAGATTAATATTGAACATGGCAAGGAGTTTTCGTTTGATAATAGATGA 1650 0.4473 MEGRSLENTPTWAVAVVCFVLLSVSIIIEYIFNIIGKWLKNKHKRALHESLEKIKSELMLLGFISLLLTVGQSVISRICISEKVAGTFHPCTHQSDHKTDARILLSELFGSDHGQNQRRILAAGGTDKCAAQGKVPFVSSEGIHQLHIFIFVLAVFHVLYCILTLALGRAKMRRWKRWEEETKTTQYQFSHDPERFRFARETSFGRRHLSFWTQNTVLVWIICFFRQFVRSVPKVDYLTLRHGFMMAHLGPQSRHKFDFRQYIKRTLEEDFKVVVEISPPIWFITVLFLLFHTHGWYSYLWLPFAPLIIVLLVGTKLQVIITKMGQRIQERGEVVKGVPLVQPGDDLFWFNKPRLILYLVNFVLFQQNSFQLAYFSWTALQFGMKSCFHSQTEDVVIKISMGVFVQFLCSYVTLPLYALVTQMGSTMKPTIFNERVAMALRNWHHGAKKHVKQQNRRSQSQAPLSGPTTPDHSMSQAHLLRRWHSEMDTYPTDSEAHRPCEIDLGPSSKVHHQEMEMDQLDHGPPQNVNDQTQHEINIEHGKEFSFDNR* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0304 549 PANTHER MLO-LIKE PROTEIN 1 2 546 IPR004326 GO:0006952|GO:0016021
Vra4g0304 549 PANTHER MLO-LIKE PROTEIN 2 546 - -
Vra4g0304 549 MobiDBLite consensus disorder prediction 504 519 - -
Vra4g0304 549 MobiDBLite consensus disorder prediction 504 530 - -
Vra4g0304 549 MobiDBLite consensus disorder prediction 456 475 - -
Vra4g0304 549 MobiDBLite consensus disorder prediction 447 475 - -
Vra4g0304 549 Pfam Mlo family 4 482 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0304 Vra-Chr4 5745955 5751419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0304 1 485 MLO family AT2G39200 62.475 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0304 K08472 - gmx:100776714 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0304 4 5745955 5751419 Vra4g0304 4 5745955 5751419 ECH
Vra4g0304 4 5745955 5751419 Vra2g0693 2 5898462 5903658 ECH
Vra3g0399 3 4639250 4644174 Vra4g0304 4 5745955 5751419 ECH
Vra4g0304 4 5745955 5751419 Vra2g0693 2 5898462 5903658 PCT