Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0303 ATGGCAGGAAGTGGAGGAAGAAATTTGGACGAAACACCTACCTGGGCGGTGGCCACTGTTTGCTTTGTTTTGCTCTCTGTATCTATCATCATCGAATACATCTTCAATCTAATAGGAAAGTGGTTGAAGCAGAAACACAAAAGAGCTCTGTACGAGTCACTTGAAAAGATCAAATCAGAGCTTATGCTATTAGGGTTCATATCGTTGCTCCTGACGATAGGGCAAGGTCTGATATCGAGAATATGCATATCAGAAAATGTTGCAGGGACGTTTCACCCTTGCACTTACAGAAGGGAGGAGAAAAAGTACCCCCCGCCATTAGAAGACGACTATTACCACCATAACCGCCACATTTTAGCGGCGGAAGCAGGTTACGACAAGTGTGCCGCCCAGGGTAAAGTCCCATTTGTCTCATCGGGAGCCATTCATCAACTCCATATATTTATCTTCGTGCTAGCTGTTTTTCACATCCTTTACTGCATTCTCACTCTGGCTCTGGGTAGGGCAAAGATGAGAAGGTGGAAACGATGGGAAGTAGAAACCAAGACAGCAGAGTACCAATATTCACACGATCCCCAGCGATTCAGATTTGCAAGAGAGACATCGTTTGGAAGAAGACACTTGAGTTTTTGGACTCAACATGTTGTCCTGGTTTGGATAGTTTGTTTCTTCAGACAGTTTGTACGCTCAGTTCCTAAGGTTGATTACTTGACCTTGAGGCATGGATTTATGATGGCGCATTTGGGGCCACACAGTCACCAGAAATTCGACTTCCGGAAATATATTAAAAGATCTTTGGAAGAGGACTTCAAAGTGGTCGTCGAAATCAGTCCTCCAATCTGGTTCATTACAGTGTTTTTTCTCCTGTTTAACACTCACGGCTGGTACTCTTATCTGTGGCTTCCATTTGCTCCTTTGATTATTGTTCTATTAGTGGGAATGAAGCTGCAAGTGATAATAACGAAGATGGGTCAAAGAATTCAAGAACGAGGAGAGGTTGTAAGGGGCATGCCTCTGGTGCAACCAGGGGATCACCTCTTCTGGTTTAACAAACCTCGACTTATTCTATACCTCATTAATTTTGTGCTCTTTCAGAACGCTTTTCAGCTTGCTTTCTTTTCATGGGCTGCGGTAAGTCCTGCAAAAACAAAAACAATGGCGTTATCTGAATTCTGCTCACATTTTCATCTTGTTTTCTTTTATGTTTTTCAGCTTCAATTTATGATGAAGTCCTGTTTCCTTTCCCAAAAGAAGGAGGTGGTGATCAGAATCTCAATGGGGATCTTCGTTCAATTCCTTTGCAGCTACGTCACTCTTCCTCTCTACGCTCTCGTGACGCAGATGGGTTCAACGATGAAGGCAACGATATTCAACGAAAGAGTAGCGATGGCTCTGAGAAATTGGCACCACACAGCGAAGAAGAACGTAAAAGAGAAGCGTGGATTACGATCGCAGAGTCCATTGTCAACGAGGCCTTCAACACCGAAGCATCCTAAGTCGAAGGCTAATCTGCTGCGACGGTATCACAGTGAAATGGCCACTTATCCATCTTCTCCTATAAGGTTCGATTTTGAGGCACATCTTCCTTATGGGATCCATTCACCTCCTTCGTCCAAGGTTAATGCTGCAGCTACTTCTTCCATTGATCAGAATGAAATGGAGATGGAGGTGGAAATGGAAATTGACATGGATCAGGTCTCAGATCTCACTCAACACCACATTGATATCCAAGACAAGCAAGGATTTTCTTTTGATAAAAGATGA 1764 0.4354 MAGSGGRNLDETPTWAVATVCFVLLSVSIIIEYIFNLIGKWLKQKHKRALYESLEKIKSELMLLGFISLLLTIGQGLISRICISENVAGTFHPCTYRREEKKYPPPLEDDYYHHNRHILAAEAGYDKCAAQGKVPFVSSGAIHQLHIFIFVLAVFHILYCILTLALGRAKMRRWKRWEVETKTAEYQYSHDPQRFRFARETSFGRRHLSFWTQHVVLVWIVCFFRQFVRSVPKVDYLTLRHGFMMAHLGPHSHQKFDFRKYIKRSLEEDFKVVVEISPPIWFITVFFLLFNTHGWYSYLWLPFAPLIIVLLVGMKLQVIITKMGQRIQERGEVVRGMPLVQPGDHLFWFNKPRLILYLINFVLFQNAFQLAFFSWAAVSPAKTKTMALSEFCSHFHLVFFYVFQLQFMMKSCFLSQKKEVVIRISMGIFVQFLCSYVTLPLYALVTQMGSTMKATIFNERVAMALRNWHHTAKKNVKEKRGLRSQSPLSTRPSTPKHPKSKANLLRRYHSEMATYPSSPIRFDFEAHLPYGIHSPPSSKVNAAATSSIDQNEMEMEVEMEIDMDQVSDLTQHHIDIQDKQGFSFDKR* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0303 587 PANTHER MLO-LIKE PROTEIN 1 391 585 IPR004326 GO:0006952|GO:0016021
Vra4g0303 587 PANTHER MLO-LIKE PROTEIN 1 3 377 IPR004326 GO:0006952|GO:0016021
Vra4g0303 587 MobiDBLite consensus disorder prediction 482 497 - -
Vra4g0303 587 MobiDBLite consensus disorder prediction 476 502 - -
Vra4g0303 587 Pfam Mlo family 7 379 IPR004326 GO:0006952|GO:0016021
Vra4g0303 587 Pfam Mlo family 389 508 IPR004326 GO:0006952|GO:0016021
Vra4g0303 587 PANTHER MLO-LIKE PROTEIN 3 377 - -
Vra4g0303 587 PANTHER MLO-LIKE PROTEIN 391 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0303 Vra-Chr4 5737874 5742734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0303 7 519 MLO family AT2G39200 56.900 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0303 K08472 - gmx:100775630 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0693 2 5898462 5903658 Vra4g0303 4 5737874 5742734 PCT