Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0271 ATGCCGAAAATGGGACTCAAAAGCTTATTCCTCTCTAAAACATCAGCATCACCACCTTCCGCAAAGCCCTTCTCCCACTCCTTATTGGACGAAAACATTGAAATTGCACGCTCTATCATTTCCAAATGGGACCTTATTCCTTCTTCTCACCAAACTTCTTCTCTCAAATCTGCAACCGTTCCTCTTTTCAGCAACACGCGTCAGGAAGCCAAACAGTACCTTAAGGCCGTTACGAGTCTGCAGTCCACTATGCATCACCTCGTTGCACTCGATTCCTCCTCCGAGAGCCTCGTTCAAGCGCAATTCCTAATGCAACTCGCCATGAAGAGGCTCCAAACCGAATTCTATCGGATTTTAGCCGAAAACAAGGACAATCTCGATCCTGAATCCGTCATTTCCACCGATCGACGGAGCAGCAGTGTCTCCGAGGACGAAGACAATTTTTCAGAGGATGAGTACCGCTTCGCCGGCGGCTCGGTATCCACTGTCGCCATGGCGGATTTGAAAGCCATTGCGGAGTGTATGGTTTCCGCGGGATACAGCAAAGAGTGCGTCAAGATTTATATCGTAATGAGGAAATCGATCGTGGATGAGGCGCTGTATCATTTAGGAGTGGAGAGGCTGAGTTTTTCTCAGGTTCAGAAGATGGACTGGGGGGTTCTGGAGTCTAAGATTAAGTGCTGGGTGAACTCCGTCCAGGTTGCCGTACAAACACTGTTTCGCGGCGAGAAATCGCTCTGCGACTACGTCTTCGGTTCGGCGGAGAGGAAGATCGCGGACTCGTGTTTTGCCGCGATTTGCGGAGATGGCGCGGCGACGCTGTTCGGGTTTCCAGATAACATGGCGAAGTGCAAGAAAACGACAGAGAAAATGTTCAGGATGCTGGACTTGTACAACGCGATCTGTGAAAACCAGCAACAAATCGAGTCCATCTTCTCGTCCGAATCAACCTCCTCCATCATATTACAGGTGTGCGCTTCAAAGGCGAGGCTTGGCGAAGCCATTCGGACGATGTTAATCAACTTTGAATCCGCGATTCACAAGGAATCTTCGAGGATTCCCGTTCCCGGAGGTGGAATCCACCCAGTCACGCGCTACGTCATGAACTACATCGCGTTCCTCGCCGATTACAAGGACGCGCTCGCCGAGATAGTTGCCGATTGGCCGCAGAATCCGTTGCCGGAGTCTTACTACCGTAGTTGCGATCGCGAGGGAGTGAATCGCTCGTCGGGGATAGCGGAACGGATCGCGTGGCTAATATTGGTGCTCCTCTGCAAACTCGACGGCAAAGCGGAACTGTACAAAGAGGTTGCGCTCTCCTACCTGTTTCTCGCAAACAACATGCAATACGTCGTCGTAAAAGTGCGAACCTCGAACCTAGGGTTAATCCTAGGCGAACATTGGTTAACGAAACACGAGCTGAGGGTGAAAGAGTACGTTTCCAAGTACGAGGGCGTTGGATGGAGCAAGGTTTTATCAACTCCCCCGGAAAACCCAACGGCGGAACAAGCGAGGGCAATTCTCGAGAGTTTCATGTCCGCATTCCGTGAAGCGTGCAGGGCACAGTCCTCGTGGGTCGTGCCCGACCCGAATCTGCGTGACGAAATAAAAGCATCGATAGCTACTAAGTTTGAACCAATATACAAAGTGTTTTTTGAGAAATATCAGCTCGGGCCGGATGCGGTTTTCGGTTGTTCGCCCGATTATTTCGAAAAAAATATCTCAAATATTTTAACGGGTTGCGTTTCGTCGTCGCAGACAGCTCCTTCTCCACCGCATCGCTATAAACGCCGGTGA 1797 0.5058 MPKMGLKSLFLSKTSASPPSAKPFSHSLLDENIEIARSIISKWDLIPSSHQTSSLKSATVPLFSNTRQEAKQYLKAVTSLQSTMHHLVALDSSSESLVQAQFLMQLAMKRLQTEFYRILAENKDNLDPESVISTDRRSSSVSEDEDNFSEDEYRFAGGSVSTVAMADLKAIAECMVSAGYSKECVKIYIVMRKSIVDEALYHLGVERLSFSQVQKMDWGVLESKIKCWVNSVQVAVQTLFRGEKSLCDYVFGSAERKIADSCFAAICGDGAATLFGFPDNMAKCKKTTEKMFRMLDLYNAICENQQQIESIFSSESTSSIILQVCASKARLGEAIRTMLINFESAIHKESSRIPVPGGGIHPVTRYVMNYIAFLADYKDALAEIVADWPQNPLPESYYRSCDREGVNRSSGIAERIAWLILVLLCKLDGKAELYKEVALSYLFLANNMQYVVVKVRTSNLGLILGEHWLTKHELRVKEYVSKYEGVGWSKVLSTPPENPTAEQARAILESFMSAFREACRAQSSWVVPDPNLRDEIKASIATKFEPIYKVFFEKYQLGPDAVFGCSPDYFEKNISNILTGCVSSSQTAPSPPHRYKRR* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0271 598 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 585 - -
Vra4g0271 598 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 585 IPR004140 GO:0000145|GO:0006887
Vra4g0271 598 Gene3D Exocyst complex component Exo70 50 586 - -
Vra4g0271 598 SUPERFAMILY Cullin repeat-like 62 574 IPR016159 -
Vra4g0271 598 Pfam Exo70 exocyst complex subunit 227 575 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0271 Vra-Chr4 5335918 5338618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0271 4 552 EXO70 exocyst subunit family AT5G59730 47.496 4.60e-169 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0271 K07195 - gmx:100801773 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0271 4 5335918 5338618 Vra4g0271 4 5335918 5338618 ECH