Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0215 ATGGCTTCATCCAGCACAACGTTCCTCGTTGTGTGTCTCTTAGCCTCGGTTCTGTATCCAATCAAGGCTAACCGAGGGGAATCTGACAGAGAAAGCTTGCATTCCATGGGTCTTATATTGGTGAAACTATGGTGTTTGATCATCATGCTCGTGAGCACTTTCGCTGGAGGGATGTCTACCTACTTCTTCCGCTGGAATGAGACTTTTCTAGTGTTGGGAACTCAGTTCGCTGGTGGGGTTTTCTTGGGAAGTTCTTTAATGCATTTCTTGGGCGATTCTAATGAGACTTTTCGAGAGCTCACCACAAAAACTTACCCTTTTGCCTTTATGCTGGCTTCATCTGGGTACCTTCTCACCATGCTTGGTGATTGCGTAGTGGGCTTTGTCAGCAGCAATGCCCAGACGAACCCCAAAGTGGAGGAACTGGAAGGAGGGACAGCATCCCAAGAGCATGAGCAAACCACGGATCACTGCGCTGTGGAGGCAACAAACCCTATGTTGTTGAAAACTTCCTCCAAGGGAGACACCATTCTACTCATCCTTGCACTTTGCTTCCATTCGGTTTTTGAGGGCATTGCCGTTGGGGTTGCAGGTACGAAGAGAGATGCGTGGAAGAACTTGTGGACAATATCCTTGCATAAGATATTTGCTGCGATCGCAATGGGAATTGCTTTGTTAAGGATGTTACCTAAGAGACCCTTATTAACAAGTGCAGTATATTCTTTGGCCTTTGCAGTATCAAGCCCCGCTGGTGTGGTGATTGGAATTGCCGTAGACGCGACAACTCGAGGAAGCACCGCAGATTGGATGTTTGCCATAACGATGGGCATTGCTTCTGGAGTGTTCATCTATGTTGCCATCAATCATTTAATAGCCAAAGGCTTCAAACAGAAGGGGACAAGCCGTTTCGACACCCCCTGGTTTAGGTTTCTCGCAGTGCTTTCTGGTGTAGCTGTTATTGCAGTTGTCATGATCTGGGACTGA 984 0.4746 MASSSTTFLVVCLLASVLYPIKANRGESDRESLHSMGLILVKLWCLIIMLVSTFAGGMSTYFFRWNETFLVLGTQFAGGVFLGSSLMHFLGDSNETFRELTTKTYPFAFMLASSGYLLTMLGDCVVGFVSSNAQTNPKVEELEGGTASQEHEQTTDHCAVEATNPMLLKTSSKGDTILLILALCFHSVFEGIAVGVAGTKRDAWKNLWTISLHKIFAAIAMGIALLRMLPKRPLLTSAVYSLAFAVSSPAGVVIGIAVDATTRGSTADWMFAITMGIASGVFIYVAINHLIAKGFKQKGTSRFDTPWFRFLAVLSGVAVIAVVMIWD* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0215 327 Pfam ZIP Zinc transporter 136 323 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vra4g0215 327 PANTHER ZINC/IRON TRANSPORTER 19 326 - -
Vra4g0215 327 PANTHER ZINC TRANSPORTER 11 19 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0215 Vra-Chr4 4880923 4881996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0215 32 327 Inorganic Solute Cotransporters AT1G55910 55.921 6.99e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0215 K14709 - gmx:100776614 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0215 4 4880923 4881996 Vra4g0215 4 4880923 4881996 ECH