Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0147 TATCAACAAGAATCCGCAAAGCTGAGACAGCAAATACAAATGTTGCAAAATTCAAACAGGCACTTGATGGGTGATGCTTTAAGCACACTAACTATGAAGGAACTTAAGCAATTGGAGAATAGACTTGAAAGAGGAATCACTAGAATCAGATCTAAGAAACATGAGATGCTATTGGCAGAAATCGAATACTTTCAGAAAAGGGTAATTGATCTGGAAAATGAAAATCTTTGTCTTCGAACTAAGATAATTGACGTTGAGAGGATTCAACAAGTAAACATGGTTTCTAGACCAGAGCTGAATGTTATTCAGGACCATCTTACCTTTAAAATTAATTGTGTTATTTGCTCGAGAGCTTTCTCTGCATCAACCAATTCTCTGTGTCGGACAAAACCCACAACAACTATGCGCTATCAACCAATTACAGGGTCAATATAA 435 0.3655 YQQESAKLRQQIQMLQNSNRHLMGDALSTLTMKELKQLENRLERGITRIRSKKHEMLLAEIEYFQKRVIDLENENLCLRTKIIDVERIQQVNMVSRPELNVIQDHLTFKINCVICSRAFSASTNSLCRTKPTTTMRYQPITGSI* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0147 144 ProSiteProfiles K-box domain profile. 1 88 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vra4g0147 144 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 104 - -
Vra4g0147 144 Coils Coil 32 74 - -
Vra4g0147 144 Pfam K-box region 1 82 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vra4g0147 144 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0147 Vra-Chr4 4090969 4091930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0147 1 103 MADS-box Gene Family AT4G09960 68.571 2.70e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0147 K09264 - vra:106758262 284.263