Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0133 ATGGCTGCCAATTTCTGGACATCTTCTCATTACAAGCATCTTCTGGACCAGGAAGATGTGGATATGGTGAATACACTTGACAAGGAAAAGGGTATCACACTGGAGGATTTTAAGCTCATTAAGATGCATATGGCCAGTTATATTTTGAAATTGGCACAACAAGTAAAAGTGAGACAGAGGGTTGTGGCCACAGCAGTTACATACATGAGGCGTGTTTACACCAAGAAGAGTATGACAGAATATGATCCACGCTTGGTAGCTCCAACATGCTTGTACCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAAGCTCGGCTTCTTGTATTTTACATTAAAAAACTATATGCTGATGAGAAGTATAGATATGAAATCAAGGACATACTTGAAATGGAAATGAAGGTTTTAGAAGCTCTTAATTATTACCTGGTTGTATACCACCCATACCGTTCACTATCTCCGTTGCTTCAGGATGCAGGTTTGAATGATCTGAACATGACTCAGCTAACTTGGGGCCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCCGCATCTGATTGCTTTAGCTTGCATATACATTGCTAGTGTACTTAGGGACAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGACATGAACGTGGTCAAAAATATATCAATGGAGATACTTGATTTTTATGAAAGCCATAGAATGTTCACTGAGGAAAGAATTAATGCTGCTCTCCAGAAGTTGACCTTGAGACCCTAA 762 0.399 MAANFWTSSHYKHLLDQEDVDMVNTLDKEKGITLEDFKLIKMHMASYILKLAQQVKVRQRVVATAVTYMRRVYTKKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYADEKYRYEIKDILEMEMKVLEALNYYLVVYHPYRSLSPLLQDAGLNDLNMTQLTWGLVNDTYKMDLILVHPPHLIALACIYIASVLRDKDTTAWFEELRVDMNVVKNISMEILDFYESHRMFTEERINAALQKLTLRP* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0133 253 Gene3D - 7 241 - -
Vra4g0133 253 PANTHER CYCLIN 4 248 IPR043198 GO:0006357|GO:0016538
Vra4g0133 253 CDD CYCLIN 46 135 IPR013763 -
Vra4g0133 253 PANTHER CYCLIN-C1-2-LIKE ISOFORM X1 4 248 - -
Vra4g0133 253 PIRSF Cyclin_C_H_G 1 253 - -
Vra4g0133 253 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Vra4g0133 253 SMART cyclin_7 46 136 IPR013763 -
Vra4g0133 253 SMART cyclin_7 149 229 IPR013763 -
Vra4g0133 253 Pfam Cyclin, N-terminal domain 42 142 IPR006671 -
Vra4g0133 253 SUPERFAMILY Cyclin-like 146 242 IPR036915 -
Vra4g0133 253 Gene3D - 19 143 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0133 21 199 Core Cell Cycle Gene Families AT5G27620 25.907 1.49e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0133 K15161 - gmx:100784345 469.929