Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1218 ATGGTTTCTCTGCCAACACTCCTCTTATTGTTCGCCGCCTCCGCCGCCGCGATCTTCCTCCATCGCGCGTTCAGCCGGCGGAAGTTTCGGCTGCCGCCGGGGAGCTATGGCCTGCCGTTCATTGGCGAGACGCTGCAGCTGATATCTGCGTATAAGAGTTCCAATCCGGAGCCGTTCATGGACGAGCGCGTGAGGCGCTACGGCTCGATCTTCATGACGCACGTATTCGGCGAGCCGACGGTGTTCTCGGCGGACCCGGAGCTGAACCGGTTCATTCTGCAGAACGAAGGGAAGCTGTTGGATTGCAGTTACCCCGGTTCCATATCGAACCTGCTCGGAAAACACTCTCTTCTGTTGATGAAAGGCGCTCTGCACAAGAGAATGCACTCGCTCACCATGAGCTTCGCCAACTCCTCCATCATCAAGGATCACCTTCTCCACCACATCGACCGCCTCATCGGCCTCAACCTCGATACCTGGTCCGATCGTGTTACTCTCATGGACCAGGCAAAAAAGATAACGTTTGAGCTAACAGTGAAGCAATTGATGAGCTTTGACCCTGATGAATGGACTGAGAGTTTAAGGAAAGAGTATGTTCTTGTCATTGAAGGCTTCTTCACTCTCCCTTTACCTCTCTTCTCCACCACATACCGGAGAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCACTGACGTTGGTAGTCAGGCAGAGGAGAGAAGAGTATAACCAAGGGAAAGAGAAAAAGAGTGACATGCTAGGGGCACTGTTGGCCTCCGGTGACCACTTTTCCGACGACCAAATAGTCGATTTCTTGTTGGCTTTGCTCGTCGCCGGTTACGAGACCACCTCTACCATAATGACTCTTGCAGTCAAGTTCCTCACTGAGACTCCTCTGGCTCTGGCACAGCTCAAGGAAGAGCATGACCAAATCAGAGCAAGGAGTGACCCCGGGGCTCCACTGGAATGGACAGATTACAAGTCAATGGTTTTTACCCAACATGTTGTGAATGAGACCTTGAGGGTGGCAAACATAATTGGTGGGATATTTAGAAGAGCAACGACAGACATCGACATAAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTTCGTGCTGTACATCTGAATCCTGAATATTACAAAGATGCACGCACCTTCAACCCCTGGAGATGGCAGAGTAACTCATCGGAAGCAGCAAACCCTGCAAATGTTTATACACCTTTTGGTGGAGGGCCACGGTTGTGCCCTGGTTATGAGCTAGCCAGAGTTGTACTTTCTGTCTTCCTTCACCGCATTGTCACCCGCTTCAGCTGGGTTCCTGCTGAGGAAGATAAGTTGGTGTTTTTCCCAACAACCAGGACGCAGAAGAGGTACCCTATTATTGTCAAGCGTAGAAATGCAAACCATGTATAG 1425 0.5081 MVSLPTLLLLFAASAAAIFLHRAFSRRKFRLPPGSYGLPFIGETLQLISAYKSSNPEPFMDERVRRYGSIFMTHVFGEPTVFSADPELNRFILQNEGKLLDCSYPGSISNLLGKHSLLLMKGALHKRMHSLTMSFANSSIIKDHLLHHIDRLIGLNLDTWSDRVTLMDQAKKITFELTVKQLMSFDPDEWTESLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLVVRQRREEYNQGKEKKSDMLGALLASGDHFSDDQIVDFLLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRARSDPGAPLEWTDYKSMVFTQHVVNETLRVANIIGGIFRRATTDIDIKGYTIPKGWKVFASFRAVHLNPEYYKDARTFNPWRWQSNSSEAANPANVYTPFGGGPRLCPGYELARVVLSVFLHRIVTRFSWVPAEEDKLVFFPTTRTQKRYPIIVKRRNANHV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1218 474 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 Gene3D Cytochrome P450 21 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PANTHER CYTOCHROME P450 26 9 468 - -
Vra3g1218 474 Pfam Cytochrome P450 32 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 SUPERFAMILY Cytochrome P450 24 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g1218 474 PANTHER CYTOCHROME P450 90A1 9 468 - -
Vra3g1218 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1218 Vra-Chr3 12925786 12931232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1218 120 470 Cytochrome P450 AT5G05690 80.057 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1218 K09588 - gmx:100795125 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1218 3 12925786 12931232 Vra6g0597 6 5371825 5382667 PCT