Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1214 ATGATTGATCCAGGAACCGAAGATCAATACTTAAAACGACGCGTTACTACAGGATGTTACGACGTAGATATTTCAAATGCCAACGACATATGGAGAAGTGAAACCGTCCTGTTCTTTTACCTTCCTACCTTGGCTGCCCAAGTTGCTTTCATGTTGTTATCCACTCGTTTTTTGTACTACATCCTCAAACCCTTAAACCAACCACGTCTTGTTTCTGAGATTTTGATGGGTATTCTGATAAGTCCAGAACTATTTGGATCATCAGCTTTATCTGAGGTTCTCACCCCTTTGAAGTCAATCCTAACAACTGAAACAATATCATACGTGGGACTCATTTACACTGTCTTCCTGGCTGGTTTGGACATGAATATTGACACAATCCTACGAGGAAGAAAGAAGGCCACAAGCATTGCCATTGCTGGAGTTTTGATTCCAATGCTGTGTGGGGGTATCATATATGCTTTGGCTCTAAAAATGTACAAGGGACCTCCGGAGTATTGGGCAAATTACGACACGCCAAAGGCTTATATGTTTTGGACCTTAATTTTGAGTGTCACAGGTTTTCCTATGGTTAGTCACATTCTTGCAGATCTCAAGCTCCTCTACACGGGACTTGGCAGAGTGACCTTAACAACAGCCATGATCAGTGACTTCTATAATTGGGTCATGTTTGCAATGTTAGTTCCATTTGCCATAAACGGTGGAAGTGCCATCTACGCCGTGGTGAGCACTATAGTTTATGTGCTTTTCTGCTTCGTTGTTATTCGTCCTTATTTGGTGGAGATAATAGTGCGCAAAACCAATCAGAATGAGTGGAACAATAATGAGTTGTTAATTGTGGTGATGGGAGCATATGCTTCTGCAGCGGTCACGGATCTGCTAGGGACACACCCTGTTGTTGGGGCTCTGGTTTATGGAATCATGATACCTCGTGGTAAATTTACCCACTTGCTCATAGAGAAGTCAGAGGATTTTGGAGTTGTTTATCTGGCTCCATTGTTCTTTGGTAGCTGTGGCATAAGGCTCAGAGCAATATATGTCATAAAAACTCAGGGTTTGGGCCTGGTGCTGTTCATTTTGCTCCTCTCAATCCTTCCGAAGATTTTAAGCACTGTAATAGCCACTCAGTTTTATGGTATGCCTGTTCTTGATGGTGTGTCTATTGGACTGCTAATGAACACCAAAGGCATCCTACCAATATTAATGCTCAACAGTGCCTGGGACAAACAGATTTTGAGTGTGGAGTCCTTCTCAATTTTGACAATAGCTGTTCTAGTAATGACCATGATGGTGCCTCTTATCATCAATGCTATATACAAGCCAAGAAAGCTATACAAACAAAATAAACTTAAGACCCTACAAAACTTAAAGGCCGAAGCAGAGCTGCGTATATTAGCTTGTGTCCACAACCCTCGGCAAGCCACAGGAATGATCAACATCCTTGAAGCATGCCACTCAACAAAACTCCCCCCTCTACGTGTGTTTGCACTTCAGCTTGTTGAACTAACTGGACACACCGCTTCCCTTTTTGTTTCCCATGCCAATCAGCACAACCAACAGCAAAGCGGTGGTGAACAAGCCCTCACCAAAGCACAGCAAGACTTGGAGAGCATCACAAATATTTTTCAAACATACGCAGCAATAAATGAGAACAGTAAAGTGGAGACCATTGCAGCTGCATCCTCCTATTCAACCATTCACGAGGACATATACAACTTGTCACAGGAGAAACAAGCCAACCTGATTCTCCTTCCTTACCACAAGCAATCAAACATAGAGGGCATTCTAGAGACAGCCAACACTGCATTCCAAGAAATAAACCGCAATGTGATGAGAGATGCACCATGCACTGTGGGAATCTTTGTTGACCGTGGACTTGCCTCATTGTTCAAAGTGAACTTGCGTGTGGTTATGGTTTTTATCGGTGGTCCTGATGATCGTGAAGCCTTGGCTGTTGCATGGAGGATGTCAAAGCATCAAGGGGTGCAACTTTCTGTGGTGAGGATCCTTATGTTTGGTGAAGCTGCTGAGATTGATGTTATATCACACGTTGAGAATCATGGACTATTATCTGTGGTAGTAGACAGTGAGAAGCAAAGGGAGTTGGATGATGAGTATGTGAGTGCATTCAGACTGCAAGCAGTGAGCAATGAGGATTCTATAAAGTATTCAGAAAAAGAAGTTCGAAGTCGTGATGATATTCCTGAGGTGCTCCATGAGGTTGACCAAATTGGTTATGATTTGTATATTTTAGGAGAAGGGGGAGGTAGGAACTGTTTGATATTGACGGAGTTGATGAAATGGACAGATTGTCCGGAACTTGGTGTCATAGGGGACATTGTGGCATCCAATAACTTTGGTTCAAGCTCTTCACTGCTTATTATACAGCAATATGGGTTTGGGGGAATGGTGTTTGAGAACGGTAATACCACACAGAAGCCTAATGAAGTAGTACCATCAAACATTGAAGATGGGCCAGTTTTTGTGGAGGTAGAATGGCATCAATAA 2508 0.4282 MIDPGTEDQYLKRRVTTGCYDVDISNANDIWRSETVLFFYLPTLAAQVAFMLLSTRFLYYILKPLNQPRLVSEILMGILISPELFGSSALSEVLTPLKSILTTETISYVGLIYTVFLAGLDMNIDTILRGRKKATSIAIAGVLIPMLCGGIIYALALKMYKGPPEYWANYDTPKAYMFWTLILSVTGFPMVSHILADLKLLYTGLGRVTLTTAMISDFYNWVMFAMLVPFAINGGSAIYAVVSTIVYVLFCFVVIRPYLVEIIVRKTNQNEWNNNELLIVVMGAYASAAVTDLLGTHPVVGALVYGIMIPRGKFTHLLIEKSEDFGVVYLAPLFFGSCGIRLRAIYVIKTQGLGLVLFILLLSILPKILSTVIATQFYGMPVLDGVSIGLLMNTKGILPILMLNSAWDKQILSVESFSILTIAVLVMTMMVPLIINAIYKPRKLYKQNKLKTLQNLKAEAELRILACVHNPRQATGMINILEACHSTKLPPLRVFALQLVELTGHTASLFVSHANQHNQQQSGGEQALTKAQQDLESITNIFQTYAAINENSKVETIAAASSYSTIHEDIYNLSQEKQANLILLPYHKQSNIEGILETANTAFQEINRNVMRDAPCTVGIFVDRGLASLFKVNLRVVMVFIGGPDDREALAVAWRMSKHQGVQLSVVRILMFGEAAEIDVISHVENHGLLSVVVDSEKQRELDDEYVSAFRLQAVSNEDSIKYSEKEVRSRDDIPEVLHEVDQIGYDLYILGEGGGRNCLILTELMKWTDCPELGVIGDIVASNNFGSSSSLLIIQQYGFGGMVFENGNTTQKPNEVVPSNIEDGPVFVEVEWHQ* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1214 835 PANTHER CATION/H + ANTIPORTER 16 817 - -
Vra3g1214 835 Gene3D - 459 772 - -
Vra3g1214 835 PANTHER CATION/H+ EXCHANGER 3 16 817 - -
Vra3g1214 835 Pfam Sodium/hydrogen exchanger family 51 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra3g1214 835 Gene3D - 43 448 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1214 Vra-Chr3 12889963 12893614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1214 19 798 Antiporter Super Family AT2G13620 36.742 8.09e-179 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1214 - - vun:114191181 1490.71