Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1078 ATGAGCGAAATGGCAGAGAAAGACAAGGTGATCCTACACGGGATGTGGGCCAGTCCATATGCCAAGAGGGTAGAATTGGCCCTTAATTTCAAGGGCATACCCTACGAGTATGTGGAAGAAGACTTGAGAAATAAGAGCGAATTGCTTCTTAAGTACAATCCGGTTCACAAGAAGGTTCCTGTACTTGTTCATAATGGAAAGGCCATTGCTGAGTCCATGGTGATCCTTGAATACATCGATGAAACATGGAAACATGCTCCCAACCTGCTTCCCATCCATTCCTACAGAAGGGCCCAAGCTCGCTTCTGGTCCAGTTTCATTCAGGATCAGTTGGTGGAGAAGACTATTCTAGTATTGAAAACTGACGGAGAAGCGCAACAGAAGGCAGTTGAACAAGTGTATGAAAAACTAAATGTGCTTGAAAATGGAATGAAGACCTATCTGGCAGAACGCGATGCAAAGGTGGAAAGCAACTTTGGAATCGTGGAAATTGTGTTTTGTGCATTGTTTGGTTGTCACGAGGCTCATGAAGAAGTTCTTGGCATGAAATTTATAGTGCCAGAAAAGTTTCCAGTGTTATTTTCTTGGTTGATGGCCATTGCAGAGGTGGAAGCAGTGAAAAAGGCAACTCCTCCACATGAAAAAACAGTGGGAATTCTTCAGCTTTTCAGGCAGTCTGCATTGAAATCTTCTGCTGCAGCCTGA 705 0.4397 MSEMAEKDKVILHGMWASPYAKRVELALNFKGIPYEYVEEDLRNKSELLLKYNPVHKKVPVLVHNGKAIAESMVILEYIDETWKHAPNLLPIHSYRRAQARFWSSFIQDQLVEKTILVLKTDGEAQQKAVEQVYEKLNVLENGMKTYLAERDAKVESNFGIVEIVFCALFGCHEAHEEVLGMKFIVPEKFPVLFSWLMAIAEVEAVKKATPPHEKTVGILQLFRQSALKSSAAA* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1078 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Vra3g1078 234 Gene3D Glutaredoxin 4 88 - -
Vra3g1078 234 Gene3D - 89 231 - -
Vra3g1078 234 CDD GST_C_Tau 95 223 IPR045074 GO:0004364|GO:0006749
Vra3g1078 234 SFLD Glutathione Transferase (cytosolic) 6 231 IPR040079 -
Vra3g1078 234 CDD GST_N_Tau 10 83 - -
Vra3g1078 234 Pfam Glutathione S-transferase, N-terminal domain 10 81 IPR004045 -
Vra3g1078 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 228 IPR010987 -
Vra3g1078 234 SUPERFAMILY GST C-terminal domain-like 81 225 IPR036282 -
Vra3g1078 234 SUPERFAMILY Thioredoxin-like 9 110 IPR036249 -
Vra3g1078 234 PANTHER GLUTATHIONE S-TRANSFERASE U9-LIKE 4 230 - -
Vra3g1078 234 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 230 IPR045073 -
Vra3g1078 234 SFLD Main.3: Omega- and Tau-like 6 231 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1078 Vra-Chr3 11129891 11131716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1078 6 234 Glutathione S-transferase Gene Family AT1G74590 45.852 5.72e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1078 K00799 - gmx:547581 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1078 3 11129891 11131716 Vra3g1078 3 11129891 11131716 ECH