Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1024 ATGTCGGACGCTTTGATCAATGGGTTGGCCGGAGCTGGAGGCGGGATCATTGCTCAGCTCATCACGTACCCACTTTCAACTGTAAACACTCGTCAACAAACCGAGCGTGATCCGAAGAGAGAGACAAGTAGCCAAGGTGCCCTCGATCGAATGTGCAAGGTTGTAAAAGAAGAAGGGTGGGAACGGTTGTATGGAGGCTTGATGCCATCTCTAGTGGGTACCGCTGCATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACATGGCTGAAGCAGCTGCGCTACAGAAAAAGGAACTGGGTGTCAGTGATGGATCAGTTGGGATGCTCTCCTCGCTTCTCACTGCTGCTTCTTCCGGGTGTGTTAACGTGCTCTTGACAAATCCCATATGGGTTGTTGTTACCCGTATGCAGGCACATAGAAAAGAGTCGAACTATGCACCTGATCAAGGTTTGTTGGTTGCCACTGAGCAAGAAACCATTTCTGCAGTTGAGCCTCTTCCTTACGGAACTAGCCGTGTGATTCAAGAAATCTTTGATGAAGCAGGTATTCGGGGTTTCTGGAAAGGTGTATTACCATCACTAATCATGGTAAGCAATCCTTCCATACAGTTCATGCTGTATGAAGCCATGTTATCAAAGTTAAGAAAAAGACGTAACAGCAACAGGGTAACTGCTTTAGAGATATTTTTTCTTGGGGCTTTGGCTAAGCTCGGAGCTACTGTTGTAACTTATCCACTCCTTGTTGTAAAGGCGAGGCTCCAGGCTAGGCAGGATAAAACAGGAGACAGGAGGCACCATTACAAAGGTACCAAGGATGCTATTATTAAAATGATCCGCTATGAAGGGTTGAATGGGTTTTACAAAGGTATGGGCACAAAAATTGTACAAAGTGTGCTTGCTGCTGCTGTTATATTCACCATGAAAGAAGAACTGGTTAGGGGGGTTCACTTCTTGCTTGCCAAGCAAGCTGCCAAAACTGTAAAGCTAAAGCCTGTCTGA 1008 0.4563 MSDALINGLAGAGGGIIAQLITYPLSTVNTRQQTERDPKRETSSQGALDRMCKVVKEEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNMAEAAALQKKELGVSDGSVGMLSSLLTAASSGCVNVLLTNPIWVVVTRMQAHRKESNYAPDQGLLVATEQETISAVEPLPYGTSRVIQEIFDEAGIRGFWKGVLPSLIMVSNPSIQFMLYEAMLSKLRKRRNSNRVTALEIFFLGALAKLGATVVTYPLLVVKARLQARQDKTGDRRHHYKGTKDAIIKMIRYEGLNGFYKGMGTKIVQSVLAAAVIFTMKEELVRGVHFLLAKQAAKTVKLKPV* 336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1024 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Vra3g1024 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 216 IPR018108 -
Vra3g1024 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 317 IPR018108 -
Vra3g1024 335 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 334 IPR044712 GO:0006862|GO:0055085
Vra3g1024 335 MobiDBLite consensus disorder prediction 29 48 - -
Vra3g1024 335 Pfam Mitochondrial carrier protein 227 316 IPR018108 -
Vra3g1024 335 Pfam Mitochondrial carrier protein 109 219 IPR018108 -
Vra3g1024 335 Pfam Mitochondrial carrier protein 7 91 IPR018108 -
Vra3g1024 335 MobiDBLite consensus disorder prediction 33 48 - -
Vra3g1024 335 SUPERFAMILY Mitochondrial carrier 3 313 IPR023395 -
Vra3g1024 335 Gene3D Mitochondrial carrier domain 9 325 IPR023395 -
Vra3g1024 335 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 334 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra3g1024 Vra-Chr3 10253722 10258581 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1024 24 316 Chloroplast and Mitochondria Gene Families AT1G25380 27.852 6.25e-33 123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1024 K13354 - gmx:100775784 541.576