Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra3g1024 | ATGTCGGACGCTTTGATCAATGGGTTGGCCGGAGCTGGAGGCGGGATCATTGCTCAGCTCATCACGTACCCACTTTCAACTGTAAACACTCGTCAACAAACCGAGCGTGATCCGAAGAGAGAGACAAGTAGCCAAGGTGCCCTCGATCGAATGTGCAAGGTTGTAAAAGAAGAAGGGTGGGAACGGTTGTATGGAGGCTTGATGCCATCTCTAGTGGGTACCGCTGCATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACATGGCTGAAGCAGCTGCGCTACAGAAAAAGGAACTGGGTGTCAGTGATGGATCAGTTGGGATGCTCTCCTCGCTTCTCACTGCTGCTTCTTCCGGGTGTGTTAACGTGCTCTTGACAAATCCCATATGGGTTGTTGTTACCCGTATGCAGGCACATAGAAAAGAGTCGAACTATGCACCTGATCAAGGTTTGTTGGTTGCCACTGAGCAAGAAACCATTTCTGCAGTTGAGCCTCTTCCTTACGGAACTAGCCGTGTGATTCAAGAAATCTTTGATGAAGCAGGTATTCGGGGTTTCTGGAAAGGTGTATTACCATCACTAATCATGGTAAGCAATCCTTCCATACAGTTCATGCTGTATGAAGCCATGTTATCAAAGTTAAGAAAAAGACGTAACAGCAACAGGGTAACTGCTTTAGAGATATTTTTTCTTGGGGCTTTGGCTAAGCTCGGAGCTACTGTTGTAACTTATCCACTCCTTGTTGTAAAGGCGAGGCTCCAGGCTAGGCAGGATAAAACAGGAGACAGGAGGCACCATTACAAAGGTACCAAGGATGCTATTATTAAAATGATCCGCTATGAAGGGTTGAATGGGTTTTACAAAGGTATGGGCACAAAAATTGTACAAAGTGTGCTTGCTGCTGCTGTTATATTCACCATGAAAGAAGAACTGGTTAGGGGGGTTCACTTCTTGCTTGCCAAGCAAGCTGCCAAAACTGTAAAGCTAAAGCCTGTCTGA | 1008 | 0.4563 | MSDALINGLAGAGGGIIAQLITYPLSTVNTRQQTERDPKRETSSQGALDRMCKVVKEEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNMAEAAALQKKELGVSDGSVGMLSSLLTAASSGCVNVLLTNPIWVVVTRMQAHRKESNYAPDQGLLVATEQETISAVEPLPYGTSRVIQEIFDEAGIRGFWKGVLPSLIMVSNPSIQFMLYEAMLSKLRKRRNSNRVTALEIFFLGALAKLGATVVTYPLLVVKARLQARQDKTGDRRHHYKGTKDAIIKMIRYEGLNGFYKGMGTKIVQSVLAAAVIFTMKEELVRGVHFLLAKQAAKTVKLKPV* | 336 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra3g1024 | 335 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 2 | 91 | IPR018108 | - | |
Vra3g1024 | 335 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 109 | 216 | IPR018108 | - | |
Vra3g1024 | 335 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 226 | 317 | IPR018108 | - | |
Vra3g1024 | 335 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 1 | 334 | IPR044712 | GO:0006862|GO:0055085 | |
Vra3g1024 | 335 | MobiDBLite | consensus disorder prediction | 29 | 48 | - | - | |
Vra3g1024 | 335 | Pfam | Mitochondrial carrier protein | 227 | 316 | IPR018108 | - | |
Vra3g1024 | 335 | Pfam | Mitochondrial carrier protein | 109 | 219 | IPR018108 | - | |
Vra3g1024 | 335 | Pfam | Mitochondrial carrier protein | 7 | 91 | IPR018108 | - | |
Vra3g1024 | 335 | MobiDBLite | consensus disorder prediction | 33 | 48 | - | - | |
Vra3g1024 | 335 | SUPERFAMILY | Mitochondrial carrier | 3 | 313 | IPR023395 | - | |
Vra3g1024 | 335 | Gene3D | Mitochondrial carrier domain | 9 | 325 | IPR023395 | - | |
Vra3g1024 | 335 | PANTHER | PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER | 1 | 334 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra3g1024 | Vra-Chr3 | 10253722 | 10258581 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra3g1024 | 24 | 316 | Chloroplast and Mitochondria Gene Families | AT1G25380 | 27.852 | 6.25e-33 | 123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra3g1024 | K13354 | - | gmx:100775784 | 541.576 |