Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra3g0992 | ATGGAGTTCACCACCAGACCCTTCTTTTTGGCAATTATGCTGCTTATGCTATCATGCGCCCCGCACGTGTCCCCCGCCACACCGTGTCCCGCGTGCGGCAACACCACGGTGCCGTTTCCCCTCAGCACCACCTCCACATGCGGCGATCCGCTGTACAAAATTCGGTGCAGCTCCGGCACACTCATCTTCGACACGCTGAACAACTCGTACCCGATCGAGTCCATCGACGCGAAATCGCAGCGCCTTGTGATACGGCCCGCTGCGCTCGTGCAGAACACGTGCGTCTCCACCGATAAGGTGCACCAGGGGATCCAGCTCAACAGCACCCTCCCCTTCAACATCACCAGTTCCAACACCATCGTCTACCTCAACTGTACCTTCATGCTCCTCCAGTCCCCCCTCAACTGCTCCGCAGCCAGCGCCTGCAACGCCTACATCAATGCCACCGCCTCCGCTTCCGCCTGCCAGAGCGGCCTCTGCTGCACCTATCGCACCGGCGGCTCCAGCAACTCCTATATGATTCGCGTAAGAGACTCTGGTTGCAGCGCCTACTCCAGCTTCGTTAACCTCAACACGGCTCAACCTGTGAGCCGCTGGCCCGAACCAGGTTTGGAGATTCAGTGGCTCTCGCCCAAAGAAACCGTTTGTGGGTCCCAGGAGGATTGCGACTCTGCCACGTCGACTTGTGGGCCCGACGCCTCCTCTACGAGCGGGATCAAAAGGTGCTTCTGTCACGACGGACTCGTGTGGGATCCCATCCAAGGGGTGTGCGCTAAAAAAATTACATGCCAGAACCCAGATGGTTGTGGGGATTCAACTAATAAAAAGGTCATAATCGCAGGTTCAGTATGTGGGGCTGGAGCAGCAATCATCCTTGCCATCATTGCCTTTCTATTCTACAAACGCCACAAGCGCATCAAAGAAGCACAAGCCCGGCTAGCCAAAGAGCGTGAAGGAATTCTGAATGCCAGTAATGGGGGAAGAGCCGCTAAACTTTTCAGTGGCAAAGAGATAAAGAAAGCCACAAATGACTTCTCCAATGACCGACTACTTGGTGTCGGGGGCTATGGTGAAGTTTACAAGGGCTTTCTTCAAGATGGTACTGCTGTGGCTGTCAAGTGTGCCAAGCTTGGCAACCCTAAAGGCACCGATCAAGTCCTTAATGAGGTTCGCATATTATGCCAAGTTAACCACCGAAACCTTGTCGGTCTACTTGGTTGCTGCGTGGAACTGGAGCAACCTATTTTGGTTTATGAGTTCATAGAAAATGGTACCGTTCTTGACCACTTGCAAGGTCAAATTCCTAAGGGCCGTGGTTTGCTTAGTTGGACTCATCGCCTTGAAATTGCACGTCAGACTGCTGAGGGTCTTGCTTACCTTCACTTCATGGCCGTGCCTCCGATCTACCACAGAGATGTCAAGTCTAGCAACATTCTGCTAGATATCAATCTGAATGCCAAGGTTTCAGATTTTGGGTTGTCTAGGTTGGCCCAGACAGATATGAGTCATATCTCCACTTGTGCTCAGGGGACCCTTGGGTACCTTGATCCTGAGTATTATAGAAACTTCCAATTGACTGAGAAGAGTGATGTTTACAGTTTTGGAGTGGTGCTTCTTGAGCTTTTGACAGCTCAGAAAGCAATAGATTTTAACAGGGCACCCGATGATGTGAACTTGGCAATTTATGTTCATAGAATGATGGAGGAGGAACAGTTGATGGATGTCATTGATCCAGTGTTGAAGAATGTAGCCACCACTATAGAGCTAGAGACTATGAAGGCAGTGGCATTTCTGGCATTGGGCTGCTTGGAGGAAAAGAGACAGAACCGACCTTCAATGAAAGAGGTAGCAGAGGAGATTGAGTATGTCATCAGTATTGCCTCAGCAAAGGTAGTGTAG | 1899 | 0.5129 | MEFTTRPFFLAIMLLMLSCAPHVSPATPCPACGNTTVPFPLSTTSTCGDPLYKIRCSSGTLIFDTLNNSYPIESIDAKSQRLVIRPAALVQNTCVSTDKVHQGIQLNSTLPFNITSSNTIVYLNCTFMLLQSPLNCSAASACNAYINATASASACQSGLCCTYRTGGSSNSYMIRVRDSGCSAYSSFVNLNTAQPVSRWPEPGLEIQWLSPKETVCGSQEDCDSATSTCGPDASSTSGIKRCFCHDGLVWDPIQGVCAKKITCQNPDGCGDSTNKKVIIAGSVCGAGAAIILAIIAFLFYKRHKRIKEAQARLAKEREGILNASNGGRAAKLFSGKEIKKATNDFSNDRLLGVGGYGEVYKGFLQDGTAVAVKCAKLGNPKGTDQVLNEVRILCQVNHRNLVGLLGCCVELEQPILVYEFIENGTVLDHLQGQIPKGRGLLSWTHRLEIARQTAEGLAYLHFMAVPPIYHRDVKSSNILLDINLNAKVSDFGLSRLAQTDMSHISTCAQGTLGYLDPEYYRNFQLTEKSDVYSFGVVLLELLTAQKAIDFNRAPDDVNLAIYVHRMMEEEQLMDVIDPVLKNVATTIELETMKAVAFLALGCLEEKRQNRPSMKEVAEEIEYVISIASAKVV* | 633 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra3g0992 | 632 | Gene3D | Transferase(Phosphotransferase) domain 1 | 421 | 630 | - | - | |
Vra3g0992 | 632 | PANTHER | OS05G0318100 PROTEIN | 20 | 629 | - | - | |
Vra3g0992 | 632 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 20 | 629 | IPR045274 | GO:0007166 | |
Vra3g0992 | 632 | Gene3D | Phosphorylase Kinase; domain 1 | 306 | 420 | - | - | |
Vra3g0992 | 632 | CDD | STKc_IRAK | 351 | 621 | - | - | |
Vra3g0992 | 632 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | - | - | |
Vra3g0992 | 632 | ProSitePatterns | Protein kinases ATP-binding region signature. | 351 | 373 | IPR017441 | GO:0005524 | |
Vra3g0992 | 632 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 468 | 480 | IPR008271 | GO:0004672|GO:0006468 | |
Vra3g0992 | 632 | SMART | serkin_6 | 345 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra3g0992 | 632 | Pfam | Wall-associated receptor kinase galacturonan-binding | 29 | 84 | IPR025287 | GO:0030247 | |
Vra3g0992 | 632 | SUPERFAMILY | Protein kinase-like (PK-like) | 329 | 619 | IPR011009 | - | |
Vra3g0992 | 632 | Pfam | Protein tyrosine and serine/threonine kinase | 348 | 619 | IPR001245 | GO:0004672|GO:0006468 | |
Vra3g0992 | 632 | ProSiteProfiles | Protein kinase domain profile. | 345 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra3g0992 | Vra-Chr3 | 9992426 | 9995812 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra3g0992 | 18 | 631 | Receptor kinase-like Gene Family | AT5G02070 | 52.524 | 0.0 | 652 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Vra3g0992 | PK_Tyr_Ser-Thr | 6.4e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra3g0992 | - | - | gmx:100305415 | 1115.52 |