Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0986 ATGGGAAAGGGAACAGGGAGTTTCGGCAAGAGGAGGAACAAAACCCACACGCTCTGTGTGAGGTGTGGCCGTCGTAGCTTCCACCTTCAAAAGAGTCGGTGTGCTGCGTGCGCCTTCCCCGCGGCGCGCACCAGAAAGTATAACTGGAGCGTTAAGGCCATTAGGAGAAAGACTACCGGAACTGGAAGAATGAGGTACCTGCGTCACGTGCCTCGCAGATTCAAGAGCGGCTTTAGAGAGGGTACCGAGGCAACACCAAGGAAGAGGGGGGCGGCTTCCACTACCTGA 288 0.566 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEATPRKRGAASTT* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0986 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Vra3g0986 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Vra3g0986 95 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Vra3g0986 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Vra3g0986 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Vra3g0986 95 MobiDBLite consensus disorder prediction 70 95 - -
Vra3g0986 95 PANTHER RIBOSOMAL PROTEIN L37 1 94 - -
Vra3g0986 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0986 Vra-Chr3 9905980 9906855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0986 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 84.211 4.97e-56 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0986 K02922 - gmx:547747 192.971