Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0965 ATGGGTGATGCAATTGATTTGACCGGGGATGGAGGAGTCATTAAGACCATTTTGAGAAAAAGCAAAGCCGATGCTGTTGGTCCTACAGAAAATTTTCCTCTTGTTGATGTTCACTATGAAGGCACACTTGCTGATACCGGTGAAGTTTTTGACACAACACACGAAGATAACACTATCTTCTCTTTTGAGCTTGGGAAGGGAAGTGTTATCAAGGCTTGGGAGATTGCAGTCAAAACCATGAAGGTCGGAGAAGTTGCAAAAATAATTTGCAAGCCAGAATATGCATATGGCAGTGCAGGATCTCCTCCCGATATTCCTCCAGAAGCAACACTTGTTTTTGAAGTTGAGTTAGTTGCCTGTCGGCCAAGGAAGGGTTCCAGTTTGGGAAGTGTTTCAGAGGAGAGGGCAAGGCTTGAAGAACTGAAGAAGCAGAGAGAGCTAGCTGCTGCTGTCAAAGAGGAAGAGAAGAAGAAGAGAGAAGAAGCAAAAGCAGCTGCTGCTGCACGTCTGCAAGCAAAGTTAGAAGCCAAAAAAGGTCAAGGAAAGGGTAAAGGTAAAGCAAAGTAG 567 0.4444 MGDAIDLTGDGGVIKTILRKSKADAVGPTENFPLVDVHYEGTLADTGEVFDTTHEDNTIFSFELGKGSVIKAWEIAVKTMKVGEVAKIICKPEYAYGSAGSPPDIPPEATLVFEVELVACRPRKGSSLGSVSEERARLEELKKQRELAAAVKEEEKKKREEAKAAAAARLQAKLEAKKGQGKGKGKAK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0965 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 1 188 - -
Vra3g0965 188 SUPERFAMILY FKBP-like 8 124 - -
Vra3g0965 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 188 - -
Vra3g0965 188 Gene3D - 2 120 IPR046357 GO:0003755
Vra3g0965 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Vra3g0965 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Vra3g0965 188 Coils Coil 131 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0965 Vra-Chr3 9735657 9742418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0965 4 173 Calmodulin-binding Proteins AT5G48570 32.512 1.10e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0965 K01802 - gmx:100500018 290.041