Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0934 ATGGCCAAAACGAAACAAACCCCAACTGTCTTGTTAACCTTATTCTCTCTGGCCACCTTCTTCGTTCTCTCTCTATCCTCTGCCGCGGACTTCTTCCTCTACGGCGGCTGCACGCAGCAACGGTACGCCTCCAACTCGCCCTACGAGTCAAACCTGAACTCCCTCCTCACCTCGCTGGTCAACTCGGCCACGTACTCCTCCTTCAACAAGCTCACCGTGGTGGGCTCCAGCCAGAGCGACGTCGTCCACGGCCTCTACCAGTGCCGTGGCGACCTCGCTATGCCGGACTGCGCCGCATGCGTTACCCGTGCTGTCGCTCGAGCCGGCCAGCTCTGCCCGGCGGCGTGTGGCGGCGTGGTGCAACTGGACGGATGCCTCGTGAAGTACGACAACTCCACGTTCCTGGGCGTGGAGGACAAGACGGTGGTGCTGAAGAGGTGTGGGCCCTCCATGGGGTTGGGGTCGGGCACGACCGGCGAGAGGGATGCAGTGTTGGGTGGCTTGGCGAGTTCGGGTGGGTATTTTCGGGTTGGCGGGTCGGGTGAGGTGAAGGGCGTGGCGCAGTGTTGTGGGGATTTGAGTTTTTCGGAGTGTCAGGATTGTGTGGGGGATGCGATCCGACGGCTGAGGAGTGAGTGTGCTGCTGCGGATTATGGGGATATGTTCTTGGGGAAATGTTACGTCAGGTTCTCCACAAATGGGGCTCATGCATACAACAATAAAGCCCATGGAAAATCAGACAACGAAGGTGAAAAAACATTTGCAATAATTGTTGGATTATTAGCTGGAGTGGCAATACTCGTTATTTTCCTTGCTTTCTTGAGAAGGATGTGTGAAGGACACGGTAAATAA 852 0.5646 MAKTKQTPTVLLTLFSLATFFVLSLSSAADFFLYGGCTQQRYASNSPYESNLNSLLTSLVNSATYSSFNKLTVVGSSQSDVVHGLYQCRGDLAMPDCAACVTRAVARAGQLCPAACGGVVQLDGCLVKYDNSTFLGVEDKTVVLKRCGPSMGLGSGTTGERDAVLGGLASSGGYFRVGGSGEVKGVAQCCGDLSFSECQDCVGDAIRRLRSECAAADYGDMFLGKCYVRFSTNGAHAYNNKAHGKSDNEGEKTFAIIVGLLAGVAILVIFLAFLRRMCEGHGK* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0934 283 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 12 279 - -
Vra3g0934 283 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 12 279 - -
Vra3g0934 283 ProSiteProfiles Gnk2-homologous domain profile. 135 235 IPR002902 -
Vra3g0934 283 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Vra3g0934 283 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Vra3g0934 283 Pfam Salt stress response/antifungal 179 232 IPR002902 -
Vra3g0934 283 Gene3D - 161 234 IPR038408 -
Vra3g0934 283 Gene3D - 29 134 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0934 Vra-Chr3 9369534 9372048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0934 11 231 Pollen Coat Proteome AT4G20670 23.967 2.32e-16 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0934 3 9369534 9372048 Vra6g0737 6 7078757 7080543 PCT