Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0913 ATGACGGACACGATACCGGCATGTTACAACGTGTCTATAGTTAATTCTAATCAATTTTGGAAAACTGACAAAGTCTTGAAAACAGAGCTTCCTATTATCGCCATTCAAATTGTTTTTGTTGTTGGGTTATCTCGTATCTTTTCCATAATCTACAAACCTTTGCATCAAACTCGTCTCATTTCACAAATCGCTGTTGGTTTCCTACTAACACCGCCATTACTAGGAAGATTCACGCCCATTTTTGAGTTCATTTTTCCGGTAAACGGGATTGTGAATGTGGAGATCCTTTCACACATTGGTCTTATTTATTATGCATTCCTTAGTGGATTAGAGATGAACTTAAATACCATTCTACACGTGAAAAGGAAAGCTGCAAGCATTGCAATTGCTGGGATAATCTTTCCCGTGCTCGTTGCACCATGGTTATATGGTTTGTTTCGAAAAGTTTATGGACATATTATGATGTTTCCCCTTGAGGAAAGTACAAGTAATGCTTATATACTTTGGACTTTAATTCTCACCGTTACAAGTTTTCCTGTAGTAGCACATACACTTTCTGAGCTTAAGCTCCTCTATACTGGTCTTGGAAAAGCGGCCTTAACAGCATCCATGATTGGTGACACCTATAGTTGGATTCTTTTCACTTTATTTGTTCCATTTTCAATTAATGGTAAAGGAGCTATCTACACTGTGCTATGCACGATAATCTTCGTTGTTGTGTGCATCTTTGTGGTACGTCCAATCATTCAATGGTTTATTGATCATAAGGCAGACAAAGATGAATGGAATGATAACCAATTGCTCTTTATATTCATGGGCGTTTTAGCTTGTTCATGCATTTCAGATTTTCTCGGTGCACATGCCATTGTTGGGGCTTTTGTTTTTGGACTAATTTTACCTCATGGGAAATTTGCTGAAATGGTCAACTCAATTTCAGATGATTTTGTTGCCGGCTTTTTAATTTTAAGCACTTTATTTGTTACTTTATTCTTCGGTATGCGTACTCGAGATGGTTTGACTTTGGGCTTGATTTTGAACAATAAAGGCGCCATGGCATTAATAATGCTGAACATTGCTTGGGATAGAACGATATTTTCTGTACCTACCTATGCCGTTATAACTTCTGCTGTTCTTCTAATGACCATACTTGTGTCTCCCGTCATCAATGCCATTTTCAAACCAAGACAGAGATTTGAACAAAACAAGCTAAAGACCATACAAAAACTAAGGGTTGATTCAGAGCTCCGACTTATAACATGTATTCATAATACTCGCCAAGCTGCAAACATGATTAGCATAATTGAATGTTTTAATGCCATGAGAGTTTCCCCTGTGCATGTTTTTGCCTTGTACCTTGTTGAACTTACTGGACGTGCTGCTGCCCTAGTTGCTGCACATATAGGGAAGCCTAACAACCAACCTGGAGAACAAAACTTAACTAGGTCTCAAGAAGAGTTAGAAAGCATTCACAATGCATTTGATGCTCTTGGAGAGGCATATGATGCTATTAGAGTTGAGACCTTAAATGTGGTGTCAGCATATGCAACTATTCATGAGGACATATATCACTCAGCAGATGAGAAACGCACAAGCTTAATTCTTCTTCCATTTCACAAACAATTAACTTTAGAAGGTACTTTAGAAGTAACTAATGTTGTATACAAAGATATAAACCAAAATGTAATGCAAGGTGCTCCCTGCTCTGTGGGAATATTTGTTGATCGTGATTTTGGGTCAGTTCCCAAAATGAACCTTCATGTTCGTGTGATTTTTGTTGGTGGTCCTGATGATCGTGAAGCCTTGGCCATTGCATGGAGGATGGCAGGACGTTCAGGAACAAAGCTCTCAATGGTTCGAATACTTCTGTTAGGTGAAGCAGCAGAAGTAGATGCTTCAGCTCACGATGAAGCACAAGAGATATTATCTGCAGTTATAGACACAGATAAGCAAAAAGAGTTAGATGATGAATATATAAACACATTCAGACTTATAGCGGTTAACAATAACGATTCAATATCCTACTCAGAGATCGATGTTCATAGTGGTGAAGATATTCCTGTAATCCTCAACGAGATAGAAAAATTTGGATGTGATCTTTACATAGTTGGACAAGGGAATTGTAGGAACTCTAAGGTATTCACAAATTTGCTAGAGTGGTGTGAGTGCTTGGAACTTGGAGTTATAGGGGACATTTTGGTGTCAAATAATTTTGGTTCACGCTCGTCTGTGCTAGTTGTTCAACAATATGGCTATGGAGGAATGATTTTTGGAAATAATCTAAACCACAAGGCCACTAGCAAAGGCATGTTTGAGTCTGTTGTTTGA 2325 0.3824 MTDTIPACYNVSIVNSNQFWKTDKVLKTELPIIAIQIVFVVGLSRIFSIIYKPLHQTRLISQIAVGFLLTPPLLGRFTPIFEFIFPVNGIVNVEILSHIGLIYYAFLSGLEMNLNTILHVKRKAASIAIAGIIFPVLVAPWLYGLFRKVYGHIMMFPLEESTSNAYILWTLILTVTSFPVVAHTLSELKLLYTGLGKAALTASMIGDTYSWILFTLFVPFSINGKGAIYTVLCTIIFVVVCIFVVRPIIQWFIDHKADKDEWNDNQLLFIFMGVLACSCISDFLGAHAIVGAFVFGLILPHGKFAEMVNSISDDFVAGFLILSTLFVTLFFGMRTRDGLTLGLILNNKGAMALIMLNIAWDRTIFSVPTYAVITSAVLLMTILVSPVINAIFKPRQRFEQNKLKTIQKLRVDSELRLITCIHNTRQAANMISIIECFNAMRVSPVHVFALYLVELTGRAAALVAAHIGKPNNQPGEQNLTRSQEELESIHNAFDALGEAYDAIRVETLNVVSAYATIHEDIYHSADEKRTSLILLPFHKQLTLEGTLEVTNVVYKDINQNVMQGAPCSVGIFVDRDFGSVPKMNLHVRVIFVGGPDDREALAIAWRMAGRSGTKLSMVRILLLGEAAEVDASAHDEAQEILSAVIDTDKQKELDDEYINTFRLIAVNNNDSISYSEIDVHSGEDIPVILNEIEKFGCDLYIVGQGNCRNSKVFTNLLEWCECLELGVIGDILVSNNFGSRSSVLVVQQYGYGGMIFGNNLNHKATSKGMFESVV* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0913 774 PANTHER CATION/H+ EXCHANGER 3 321 762 - -
Vra3g0913 774 PANTHER CATION/H+ EXCHANGER 3 5 320 - -
Vra3g0913 774 Pfam Sodium/hydrogen exchanger family 39 328 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra3g0913 774 PANTHER CATION/H + ANTIPORTER 321 762 - -
Vra3g0913 774 PANTHER CATION/H + ANTIPORTER 5 320 - -
Vra3g0913 774 Gene3D - 441 709 - -
Vra3g0913 774 Gene3D - 32 333 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0913 Vra-Chr3 9151538 9154159 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0913 2 749 Antiporter Super Family AT2G13620 34.843 4.07e-165 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0913 - - gmx:100800072 1220.3