Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0909 ATGACGGACACACTACCTGCATGTTACAATGTATCTATAGTCAATCCTAATCAATTTTGGAAAACTGATAAAGTCTCGAAAACAGAGCTCCCTATTCTAGCCATTCAAATTGCTTTTGTTGCTGTGTTATCTTGTCTCTTTTCTACAATTTACAAACCTCTACATCAAACTCGTCTCATTTCACAAATCTCTGTTGGTTTCCTACTGACACCGCCATTACTAGGAAGATTCACGCCCATTTTTGAGTTCATTTTTCCAGTAAATGGGATTGTGAATGTGGAGGTTCTTTCCCATATTGGCCTCATTTATTATGCATTCCTTAGTGGATTGGAGATGAACTTAAATACCATTTTACACATGAAAAAGAAACCTGCAACCATCACTATTGTTGGGATCATCTTTCCCATACTTGTTGCACCATGCTTATATGCTTTGTTTCGAAAAGTTTATGGCCATATTATGATGTTTCCCCTTGAGGAAAGTACAAATAATACTTATATACTTTGGACTTTAATTCTCACTGTCACAAGTTTTCCTGTGGTAGCACACACGCTTTCTGAGCTTAAGCTCCTTTATACTGGTCTTGGTAAAGCGGCTTTAACAGCAGCTATGATTGGTGACACCTATGGTTGGATTCTTTTCACTTTATTTGTTCCATTTTCAACTAATGGTAAAGGAGCTATTTACACTGTGCCATGCACGCTAATCTTCATTCTTGTGTGCATATTTGTGGTACGTCCAATCATTCAATGGTTTATTGATCGCAAGGAAGACAAAGATGAATGGAATGATAATCAATTGCTTTTTATAATCATGGGGGTTTTAGCTTGCTCATGTATTTCAGATTTTCTCGGTGCACATGCCATTGTTGGAGCTTTTGTTTTTGGATTAATTTTACCTCATGGAAGATTTGCTGAATTGGTCATGTCAATTTCAGATGATTTTGTCGGAGGATTTTTAGTTCCCCTCTTCTTTACTGGAACTGGGATGAGACTTATTTTGGCCGCAATTTTCTCCCAACAAAGTTGGCCCTTTGTACTTGTGATTATACTCTTATTGTGTGCTTTAAAGATTTTAAGCACTTTAATTGTCACCTTCTTCTTCGGTATGCGTATTCGAGATGGTTTAACCTTGGGCTTAATTTTGAATAATAAAGGTGCCATGGCATTAATAATGTTGAACATTGCTTGGGATAGAACGATATTTTCAGTACCTACTTATGCCGTTATAACTTCTGCTGTTCTTCTGATGACCGTAGTTGTGTCTCCCATCATCAATGTTGTCTACAAGCCAAGACAAAGATTTGAACAAAACAAGCTAAAGACCATACAAAAACTAAGAGTTGATGCAGAGCTTCGAATTATATCATGTGTTCACAATACTCGCCAAGCTGCAAGCATGATTAGCATAGTTGAGTGTTTTAATGCCATGAGAGTTTCCCCTATCCATGTGTTTGCCTTGTATCTTGTTGAACTTACTGGACGAGCTGCTGCCCTAGTTGCTGCACATATAGGGAAGCCTAGCAGCCAACCCGGAGAACAAAACTTAACTAGGTCACAAGAAGAGTTAGAAAGCATTCACAATGCATTTGATGCCCTTGGAGAGGCATATGACGCTATTAGAGTTGAGACCTTAAATGTGGTGTCAGCATATACAACTATTCATGAGGACATATACCACTCAGCAGATGAGAAACGCACAAGCTTGATTCTCCTTCCATTTCATAAACAATTAACTTTAGAAGGTACTCTAGAAGTAACAAGTGTTGTATACAAAGATATAAATCAAAATGTAATGCAAGGTGCTCCATGCTCTGTGGGAATATTTGTTGATCGTGATTTTGGGTTAGTTCCTAAAAGGAACCTTCATGTTCGCGTGGTATTTGTTGGGGGCCCTGATGATCGTGAAGCCTTGGCCATCGCATGGAGGATGGCAGGATGTTCAGGAACACAACTCTCAGTGGTTCGAATTCTTCTATTGGGTGAAGCGGCAGAAGCAGATGCATCGGTTCATGATGAAAAACAAGGGATATTATCTGCAGTAATAGATACAGAGAAGCAAAAAGAGTTAGATGATGAGTATATAAGCACATTCAGACTTACCGGGGTTCACAATAACGATTCAATATCCTATTCAGAGATTGATGTTCATAGTGGAGAAGATATTCCTGCAATCCTAAATGAGATAGAAAAATTTGGTTGTGATCTTTACATAGTTGGACAAGGAAATTGTAGGAACTCTAAGGTCTTCTCAAATTTGCTGGAGTGGTGTGAGTGCTTAGAACTTGGAGTTATAGGGGACATTTTAGTGTCAAACAATTTTGGTTCACGCTCTTCTGTGCTAGTTGTTCAACAATATGGATATGGAGGAATGAATTTTAGAGATAATCTTAACCAAAAAGACACTAACAATGACATGGTTGAGTCTGTTGTTTGA 2436 0.3826 MTDTLPACYNVSIVNPNQFWKTDKVSKTELPILAIQIAFVAVLSCLFSTIYKPLHQTRLISQISVGFLLTPPLLGRFTPIFEFIFPVNGIVNVEVLSHIGLIYYAFLSGLEMNLNTILHMKKKPATITIVGIIFPILVAPCLYALFRKVYGHIMMFPLEESTNNTYILWTLILTVTSFPVVAHTLSELKLLYTGLGKAALTAAMIGDTYGWILFTLFVPFSTNGKGAIYTVPCTLIFILVCIFVVRPIIQWFIDRKEDKDEWNDNQLLFIIMGVLACSCISDFLGAHAIVGAFVFGLILPHGRFAELVMSISDDFVGGFLVPLFFTGTGMRLILAAIFSQQSWPFVLVIILLLCALKILSTLIVTFFFGMRIRDGLTLGLILNNKGAMALIMLNIAWDRTIFSVPTYAVITSAVLLMTVVVSPIINVVYKPRQRFEQNKLKTIQKLRVDAELRIISCVHNTRQAASMISIVECFNAMRVSPIHVFALYLVELTGRAAALVAAHIGKPSSQPGEQNLTRSQEELESIHNAFDALGEAYDAIRVETLNVVSAYTTIHEDIYHSADEKRTSLILLPFHKQLTLEGTLEVTSVVYKDINQNVMQGAPCSVGIFVDRDFGLVPKRNLHVRVVFVGGPDDREALAIAWRMAGCSGTQLSVVRILLLGEAAEADASVHDEKQGILSAVIDTEKQKELDDEYISTFRLTGVHNNDSISYSEIDVHSGEDIPAILNEIEKFGCDLYIVGQGNCRNSKVFSNLLEWCECLELGVIGDILVSNNFGSRSSVLVVQQYGYGGMNFRDNLNQKDTNNDMVESVV* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0909 811 Gene3D - 32 439 IPR038770 -
Vra3g0909 811 PANTHER CATION/H + ANTIPORTER 5 799 - -
Vra3g0909 811 Pfam Sodium/hydrogen exchanger family 39 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra3g0909 811 Gene3D - 481 747 - -
Vra3g0909 811 PANTHER CATION/H+ EXCHANGER 3 5 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0909 Vra-Chr3 9124920 9127545 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0909 2 786 Antiporter Super Family AT2G13620 37.406 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0909 - - gmx:100800072 1280.77