Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0898 ATGGAATCAAAAAGACAATCCCAAGAGGAGGACAAAAGGGCTGATCAAAAGCGGAGTCGTCAGAATTCACAACTATGGGAAATATTGCGTATTAGAAGGTATCTGCCTCTCATTTGGAATGAGCCCTATTTGGAAGATTTTATTCGAAATACGACCCGAGAGGTGGTTGAACTCCAACTACCAAGACTAACAAGTAGTATTCAGACTGAAATATCTGGAGGCCACAGATTCTTGAAGCTGGTTTTTAGGAATGAATTGCCTGATACAATTTATACTATGTCCAAGTTGAAAGCTAGAGACAACAATCCTCTTGAGGTCGTTCTTTTCGATACTAAATCTCAGTCTATAGTCTCTGATGAGAATGATCCACTGTCTTCGATCAAGGTAGAGATTTGCGCCCTTGATGGTGAGTTTGGTTCAGATGGCAGTGAAAATTGGAGCAAAGATGAATTCAAATCCAAAATCTTAAGTCCAAGAAGCAATAAAGGGCAGTTACTGAAAGGAGACACGGTTTTTGCGCTTAAAAATGGAGTAGGTTTTATCCACAATGAATTCACTGACAACTCATCTTGGATAAGAACAGGACGTTTCAGATTAGGAGCGATAGTTGCGAAATCAAATATGAATGACGCATTAATCATCAAGGAAGGTATAAGTAAACCTTTTAGAGTCAGGGACTACAGAAGTGAGTTGAACAAGACAAAGAATCCATCCCTCAGTGATGAAATATGGCATTTGAAACATATATCAAAAAAAGGGAAAATTTTTGAGCAGCTTTCTAAGGACGGGATACTCACTGTTGGGGATTTTTTGAAGGAGCATGAAACCAATCCATTATCTTTGGAAGAGAAACTCAGCAAGATTTCCTCCAAAAGACAACGGGAAGAAATATATAAGCAGGCTAAGAAAGCAAAGCATGCTGAGACTGGTGTTGCTGAAACCATATTATTTGAAGGACAAAATTATCTGTCAGAGAATAATACTTTCAACTCCGATCAGATGCAGGCATGTCAAAGTTCGAGGAGTCTGATGCAGGTTGAGCTGATAAATGGTGCTCCAGATCAAGATGTTCAACGGGTTGCTCAGCAAGAAGAAAGTCTTTGCCGAAGGGGCATAGAAGACTGGTTTGATGAATTATCACAGAATGATGAACTTGATCTACTCATATATCCTTTGCTCCCTCCAAGTAATAATGATGAAGCAGAACCTGACAAAAACCGTGCTTTGTATTCGTCAAACAAAGGGAAAAGCAAGATGATGTAA 1263 0.3927 MESKRQSQEEDKRADQKRSRQNSQLWEILRIRRYLPLIWNEPYLEDFIRNTTREVVELQLPRLTSSIQTEISGGHRFLKLVFRNELPDTIYTMSKLKARDNNPLEVVLFDTKSQSIVSDENDPLSSIKVEICALDGEFGSDGSENWSKDEFKSKILSPRSNKGQLLKGDTVFALKNGVGFIHNEFTDNSSWIRTGRFRLGAIVAKSNMNDALIIKEGISKPFRVRDYRSELNKTKNPSLSDEIWHLKHISKKGKIFEQLSKDGILTVGDFLKEHETNPLSLEEKLSKISSKRQREEIYKQAKKAKHAETGVAETILFEGQNYLSENNTFNSDQMQACQSSRSLMQVELINGAPDQDVQRVAQQEESLCRRGIEDWFDELSQNDELDLLIYPLLPPSNNDEAEPDKNRALYSSNKGKSKMM* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0898 420 Pfam Calmodulin binding protein-like N-terminal domain 78 226 IPR046831 -
Vra3g0898 420 Pfam Calmodulin binding protein central domain 238 303 IPR046830 -
Vra3g0898 420 PANTHER CALMODULIN-BINDING PROTEIN 1 333 - -
Vra3g0898 420 MobiDBLite consensus disorder prediction 395 420 - -
Vra3g0898 420 PANTHER OS02G0177800 PROTEIN 1 333 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0898 Vra-Chr3 9029678 9035769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0898 44 336 Calmodulin-binding Proteins AT2G24300 33.333 2.51e-38 144