Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0897 ATGGCACCAAAAAGAAACTGTGACGAGGAGGATCATCACAATAACGACGACACCCATCTTCAAACTGTTGCTAAAAGGAGACGCGACGGGACCATCGATCATTCGCTTCTTGCCGCTTTGGAACCTGTTCTTCGCAAATTGATGGAGGAGTTGATTCCTCCTATGCTAGAGCGTCACGTGTCCCCGTGTTGTCGATTTTGCCATAACCATCAGGGTGGCAGTTCCGGAGGCAGAGCTTACCAATTGTGCTTCGTCAATGGATTGCCTCAAGTAATTTTCACCATGGCCAATCTCACAGCTGAGGACGGTGGTTCACTTGAAATTGAGCTGCGGGATGCTGCATCGCAGCAACGCGTTGACACAGAGGAATTTTCGAGCATGAAGGCTCAGATCTATGTGCTGGATGGTGCTTTTGAAAGTCAGGACTGGACTGCAGAGGAATTTGATGGCAACATTGTGAAACCAAGAGAGGGGAAGGCACCATTACTCAGAGGACAAACGGTTATTAAAATTGAAAAAGGGGTTGGTTTTATCGATAAGAAGAGGCTTAAGATTACTGATAACTCTAGCACCACAAGAAGCAAAACGTTTCGGTTGGGAGTTAAAATCGTGGGAACTAACTCCCATGGAGTAGGAATCAGGGAAGCCATAAGCGAACCCTTCAGGGTCAAGGATAAACGTGGAGAGTCGGCAAGGAAATCCGAGCGTCCAGCCTTGAACGATGAAGTATGGCGTCTGAGGAACATTGGAAAAGCGGGTGAGCTTCGCAAGCAGCTTTCCCAGAATAGAATAAAGACTGTGAAGGATCTTTTGCGGTGGGACACAATCGGTTTATTACGGAAGAAATTCAGCAAGATTAATGCATGGGACAAAATCATTGAACATGCTAAAGAATGTGAACTAGATGATTCTGAGCGCTACTTGTATACGTATCGTGCCACGGAACCAGAGAAATCTGTTTCCCTTGTCTTTAACTGCATCTATGAGCTTGTGGAGGTCATTATTAACGGCCAACATCGTTCTCTGCAATCTCTGAATTCGGAGGAGGAGCGTTTGGTGGGAAGAATGAAGGTGGAAGCATACTCAAATCTGGAGCATCTGGAGCCAATTGCTGCCACACCAACAACACATGATGACTTAGTGTCGAAGTTAACAGGTACACAGGCGGTGTCATACAGTGCTGCATATCAAGGTCTGCAACTGCCTGATCACCAAGATGCAGGTCAATTGGAATCATCAACATCAATTGCAAATGATCCCTGGCCGTTCTTCTTCGAAGATGAGCAACCAAATTTTTTATACTATGCATGTGATGTTGATGATGACTATGGAGGAGGAGGAGGATCATGTAGCAAAGGCAGCTCCTTTTTGCCTAACACTGCTGAGTATATGTCAAGAAAAGGGAAAGCCAAGACGGTTTGGCAGAAAGTCAGAAATGCTTTCAAACTCCTCATACATCCGAATATGGCTTAA 1473 0.4562 MAPKRNCDEEDHHNNDDTHLQTVAKRRRDGTIDHSLLAALEPVLRKLMEELIPPMLERHVSPCCRFCHNHQGGSSGGRAYQLCFVNGLPQVIFTMANLTAEDGGSLEIELRDAASQQRVDTEEFSSMKAQIYVLDGAFESQDWTAEEFDGNIVKPREGKAPLLRGQTVIKIEKGVGFIDKKRLKITDNSSTTRSKTFRLGVKIVGTNSHGVGIREAISEPFRVKDKRGESARKSERPALNDEVWRLRNIGKAGELRKQLSQNRIKTVKDLLRWDTIGLLRKKFSKINAWDKIIEHAKECELDDSERYLYTYRATEPEKSVSLVFNCIYELVEVIINGQHRSLQSLNSEEERLVGRMKVEAYSNLEHLEPIAATPTTHDDLVSKLTGTQAVSYSAAYQGLQLPDHQDAGQLESSTSIANDPWPFFFEDEQPNFLYYACDVDDDYGGGGGSCSKGSSFLPNTAEYMSRKGKAKTVWQKVRNAFKLLIHPNMA* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0897 490 Pfam Calmodulin binding protein central domain 238 299 IPR046830 -
Vra3g0897 490 PANTHER OS02G0177800 PROTEIN 2 484 IPR012416 GO:0005516
Vra3g0897 490 PANTHER CALMODULIN-BINDING PROTEIN 60 G 2 484 - -
Vra3g0897 490 Pfam Calmodulin binding protein C-terminal domain 308 369 IPR046829 -
Vra3g0897 490 Pfam Calmodulin binding protein-like N-terminal domain 80 226 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0897 Vra-Chr3 9026755 9029420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0897 18 370 Calmodulin-binding Proteins AT5G26920 36.288 8.93e-63 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0897 - - vra:106757360 943.34