Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0883 ATGGCGTCTTTCCACCCCAACCTCCATTCTGTTACGTCATCGCAACAATCCAATCACAAGAAGCGCCGCAAACTCCCGCACCACGCTTCCGCTCCCTCTCCATGGACCTCCCAAACCGAACACCGCATCTACGCCACCAATCTCCTCCACGCGCTCCGCCGTAGCAGCCCTTCCGCTGCCAGCGATATCCGCGCAGCCGCCGACCGTGCCCTCGCCGCCACGGCCAAAGGCCGAACTCGCTGGAGCCGCGCGATTCTCGCAAATCCGTTTGGCCGGTGGAAGGGGAGGCACCACATGAAGGCCAGGAAGTCCCGCGCTGGATTGATGAAGAAGAGGACGCCGGAGATTCGGAGAACGGCCCCGCCGCTGCAGAAGAAAGCGCGCTCTCTCGGACGGTTAGTCCCTGGTTGTCGGAGGGTGTCGTTCCCGAAGCTTCTAGAAGAAGCCGGTGATTATATCTCTGCCTTGGAGATGCAAGTGCGAGCCATGACGGCTCTCGCCGACCTTCTCGCCGGCGGCCCCTCGCCCCCCGCTCCTCTCCGTTTGAGTTGA 552 0.625 MASFHPNLHSVTSSQQSNHKKRRKLPHHASAPSPWTSQTEHRIYATNLLHALRRSSPSAASDIRAAADRALAATAKGRTRWSRAILANPFGRWKGRHHMKARKSRAGLMKKRTPEIRRTAPPLQKKARSLGRLVPGCRRVSFPKLLEEAGDYISALEMQVRAMTALADLLAGGPSPPAPLRLS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0883 183 MobiDBLite consensus disorder prediction 1 38 - -
Vra3g0883 183 PANTHER TRANSCRIPTION FACTOR BHLH150 15 176 - -
Vra3g0883 183 MobiDBLite consensus disorder prediction 1 15 - -
Vra3g0883 183 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 176 IPR044660 GO:0006355
Vra3g0883 183 CDD bHLH_AtIBH1_like 117 167 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0883 Vra-Chr3 8900375 8901388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0883 35 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 38.122 9.38e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0883 - - gmx:100813766 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0883 3 8900375 8901388 Vra8g1388 8 30771021 30771985 PCT