Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0877 ATGAAACCATCCCCTAAGATCCTAATTGGTCACAAGAATTCATCGTTTCTTGCAAGATGTCACCATACTCTGATCATGTCTATGTCCAATAACTCAACCGCTTGTGACCTCAATCTTCATCTCAAGACCATGCAGTGCCCTTTTCACGTGCGGGAATTTGGACGCATAATGCATGGAAGTCAACAAGTTTTCGGGCTGCTCTCTTCGAGTTTTGGCCAATCAAGTTCCATCGGTTTAAGCACAACAAGAACCACAAAACGGGGTGTGTCTGCCATTGCCGGGATAGACTTCAAATTCAAGTCTCGTGACTTCTCAAGCTCCGTGGAGACATGTGAGAACATTAATGGTAAAATGGTTTACCTAAAGGATGGCATGAATGTGAAGCCAACAGCGGAGGAAAGGGTTGACAATGACGAGGATAGTGTTGGAGGAGAGGAAGTGTCTGGTTTAGAAGCTGATGAGAAAAATAACAAGAGTGAGAATGAACAAGAGGGTGAGAAGGTAGAGGAGGAGGAGACAGAAGTGGAGAAAGAGGCATGGAGTTTATTGCAAGAGGCACTCGTGACATACTGTGATAACCCTGTGGGGACGGTGGCAGCGAATGATTCGGATGATCAACAACCTTTGAATTATGATCAGGTTTTTATAAGGGATTTTATCCCTTCGGCTCTTGCTTTCTTGCTCAAGGGAGAAAAGGAGATTGTCAAGAACTTTCTCCTTTACACCTTGCAACTCCAGAGTTGGGAGAAAACAGTGGACTGCCATAGCCCAGGGCAGGGCCTGATGCCTGCTAGTTTCAAAGTTAAAACTATGAAAGTTGACGGAAAAAGTGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATAGGTCGTGTTGCTCCTGTAGATTCAGGATTGTGGTGGATCATCCTGCTGCAGGCTTATGGGAAGATTACTGGGGACTGCAGCTTGCAAGAAAGGTTGGATGTTCAAACAGGCCTAAAAATGATCCTTAATCTGTGCTTAACGGATGGCTTTGATATGTTTCCTTCTCTGTTAGTAACCGATGGATCTTGCATGATAGACAGGAGGATGGGTATTCATGGCCACCCCCTTGAGATTCAGGCCTTGTTTTACTCAGCTCTTCGCTCGGCCCGTGATATGGTTGCTTCAGATGAAAATTCCAAGAATCTGGTTGGAGAAATTAACAACAGACTCAGTGCACTATCATTTCACATTAGAGAATACTATTGGTTGGATGTGCAAAAGATGAATGAGATATACAGGTACAAAACAGAAGAGTACTCATTGGATGCCACAAACAAGTTCAACATCTATCCAGATCAAATCCCTTTGTGGCTAATTGATTGGGTTCCAACCAACGGAGGATATCTTTTAGGGAATCTGCAGCCAGCTCATATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCAATCGTTTCCTCTTTGGGCACCCCAGGGCAGAATGATGCTATTTTGAATCTGATAGAAGCAAATTGGAAGGATCTAGTGGGGGAAATGCCTCTTAAGATATGTTATCCTGCCTTGGAGCATCATGAATGGCGAATAATTACAGGCTCTGACCCCAAGAACACCCCTTGGTCATATCATAATGGTGGGTCCTGGCCAACCCTTCTGTGGCAGTTCACACTTGCATGCATGAAAATGAATAGAACTGAACTGGCAGAAAAAGCAGTTGCTTTGGCTGAGAAAAGGCTGCCCCGTGATTCTTGGCCAGAATATTATGACACACCCAATGCAAGATTTATTGGCAAACAAGCCCGGCTTTATCAAACTTGGACTTTAGCTGGGTTCCTTGCATCTAAGATGCTTTTGAAGAATCCTAATTTGGCTTCCTTGTTATGGTGGGATGAGGATTTTGAGATCCTTGAGAATTGTATTTGTTTGCTTCACAAGAGTGGCAGAGTCAAATCCTCTCGTGTCCCTGACAAATCTCAGATTCTCGTGTGA 1977 0.4385 MKPSPKILIGHKNSSFLARCHHTLIMSMSNNSTACDLNLHLKTMQCPFHVREFGRIMHGSQQVFGLLSSSFGQSSSIGLSTTRTTKRGVSAIAGIDFKFKSRDFSSSVETCENINGKMVYLKDGMNVKPTAEERVDNDEDSVGGEEVSGLEADEKNNKSENEQEGEKVEEEETEVEKEAWSLLQEALVTYCDNPVGTVAANDSDDQQPLNYDQVFIRDFIPSALAFLLKGEKEIVKNFLLYTLQLQSWEKTVDCHSPGQGLMPASFKVKTMKVDGKSEEVLDPDFGESAIGRVAPVDSGLWWIILLQAYGKITGDCSLQERLDVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSARDMVASDENSKNLVGEINNRLSALSFHIREYYWLDVQKMNEIYRYKTEEYSLDATNKFNIYPDQIPLWLIDWVPTNGGYLLGNLQPAHMDFRFFMLGNLWSIVSSLGTPGQNDAILNLIEANWKDLVGEMPLKICYPALEHHEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACMKMNRTELAEKAVALAEKRLPRDSWPEYYDTPNARFIGKQARLYQTWTLAGFLASKMLLKNPNLASLLWWDEDFEILENCICLLHKSGRVKSSRVPDKSQILV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0877 658 PANTHER ALKALINE/NEUTRAL INVERTASE 1 658 - -
Vra3g0877 658 SUPERFAMILY Six-hairpin glycosidases 179 609 IPR008928 GO:0005975
Vra3g0877 658 Coils Coil 158 178 - -
Vra3g0877 658 Gene3D - 205 608 IPR012341 GO:0005975
Vra3g0877 658 PANTHER - 1 658 IPR024746 GO:0033926
Vra3g0877 658 MobiDBLite consensus disorder prediction 148 164 - -
Vra3g0877 658 MobiDBLite consensus disorder prediction 131 175 - -
Vra3g0877 658 Pfam Alkaline and neutral invertase 179 617 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0877 Vra-Chr3 8867974 8871352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0877 - - gmx:100812691 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0877 3 8867974 8871352 Vra8g1394 8 30828133 30846570 PCT