Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0863 ATGGGGTCTGGTCTTAATGCTGAATTATCCAAGAAAACTCCAATTTTCGGTCTCAAAGTTTGGGAAATCATTGGAATTGTAGTTGGTTTGTCAATAATAGTCATTCTTTCTGTGGTCTCACTTTGCCTCACGTCAAGGAAGAAATCTAGAAAAGAGAAAGACAGGATTCCCCTTAGTCAAATACCAACTGTGTCAAAGGAAATCAAGGAAGTGCGGGTTGAACAAGTGCCAACTAATTCATTTGCTCCTCGCGATGGAATACTTCTTACAATTCGGGACAAGTCCAGTGGCAAGGAATCAGACAATGTCATGGTTCATTTAGGTGTGGGGAAGATGAAGAATGGGAACAGCAACACTCACTCAGATTCATTTCGTTACATAGAGAAAGATGGAAGCGGTTCACACTCACAGTCCGGAGAAGAAGGTAGCTCTGGCACGTTTACAGTGTACAAGCAATCTTCTTCACACCCTATAACAGCTCCCTCACCTCTATCTGGCCTTCCAGAATTTTCTCACTTGGGTTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCCACTAACCGTTTTTCCAAAGAAAATGTCCTGGGTGAAGGAGGGTATGGAGTAGTTTATAAGGGCCAATTGGTCAATGGAACTCCAGTTGCAGTTAAAAAGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACACAAAAACCTGGTTCGCCTTTTGGGGTTCTGCGTTGAGGGAACCCACAGGATGTTGGTTTATGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGCAATGCGGCACCATGGATACCTTACCTGGGAAGCACGTATCAAGATTCTGCTGGGCACGGCCAAAGCGCTAGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGTGATATCAAGTCAAGCAACATATTAATTGATGATGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTATTGGGTGCTGGGAAGAGTTATGTCACCACAAGAGTTATGGGAACTTTTGGATACGTGGCTCCTGAATATGCAAATACTGGTCTTCTGAATGAGAAGAGTGATGTTTATAGCTTTGGTGTTTTGTTATTGGAAGGAATTACTGGAAGAGACCCAGTTGACTATGGTCGACCAGCAAATGAAGTGAACCTGGTTGATTGGCTGAAGATGATGGTTGGTAATAGGAGATCAGAAGAAGTGGTGGACCCCAACATTGAGGTGAAGCCATCCACAAGAGCTTTAAAACGGGCTCTCTTAACAGCTTTAAGATGTGTAGATCCAGATTCTGAGAAAAGGCCGAAGATGGGCCAAGTGGTTCGAATGGTGGAGTCAGAGGAATACCCTTTACCAAGAGAGGACCGAAGACACCGAAGAAGAAATGGAGGGGGGAGTGGAGAAATGGATTCCCAGAAGGAATATTCTGACACAGACAGGAGTGAGATTCAGGATTCCAGAGAAGAAAGAAGAGGGTGA 1533 0.4397 MGSGLNAELSKKTPIFGLKVWEIIGIVVGLSIIVILSVVSLCLTSRKKSRKEKDRIPLSQIPTVSKEIKEVRVEQVPTNSFAPRDGILLTIRDKSSGKESDNVMVHLGVGKMKNGNSNTHSDSFRYIEKDGSGSHSQSGEEGSSGTFTVYKQSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYKGQLVNGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGFCVEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSYVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPANEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMVESEEYPLPREDRRHRRRNGGGSGEMDSQKEYSDTDRSEIQDSREERRG* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0863 510 Gene3D Transferase(Phosphotransferase) domain 1 267 476 - -
Vra3g0863 510 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra3g0863 510 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Vra3g0863 510 MobiDBLite consensus disorder prediction 449 510 - -
Vra3g0863 510 Gene3D Phosphorylase Kinase; domain 1 172 266 - -
Vra3g0863 510 MobiDBLite consensus disorder prediction 111 149 - -
Vra3g0863 510 ProSiteProfiles Protein kinase domain profile. 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra3g0863 510 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 508 - -
Vra3g0863 510 CDD STKc_IRAK 197 463 - -
Vra3g0863 510 MobiDBLite consensus disorder prediction 130 149 - -
Vra3g0863 510 Pfam Protein kinase domain 192 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra3g0863 510 PANTHER OS01G0323000 PROTEIN 3 508 - -
Vra3g0863 510 SUPERFAMILY Protein kinase-like (PK-like) 175 466 IPR011009 -
Vra3g0863 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0863 Vra-Chr3 8750910 8755344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0863 116 465 Trihelix Transcription Factor Family AT1G70460 44.444 5.49e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Vra3g0863 Pkinase 9.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0863 - - gmx:100787014 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0863 3 8750910 8755344 Vra6g0761 6 7387810 7395581 PCT
Vra8g1408 8 30944004 30949244 Vra3g0863 3 8750910 8755344 PCT