Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0846 ATGGAAGAATCATGGAGTACAACTACAAGTGCATCTGCCTGCATAGTTCTCATAGTGCTCCTTACTCTAACATGCGCATGGTGGGTGCTGAATTGGTTATGGCTAAGGCCAAAGAGACTAGAGAGACTCCTAAGAGATCAAGGCCTTCAAGGAAAACCCTACAGGCTTTTCAATGGAGATTTGAAGCAGATTATGAAGATGCAAAAGGAAGTCACATCCAAACCCATGAAACTCTCTCATGATATAGCGCCACGTGTCTTTTCTTATCATCTGCAGAGTGTCATCAAACATGGGAAGAATCCTTTTATTTGGTTTGGACGAAAACCAAGGGTGATCATCACAGAGCCTGAGTTAATCAAAGAAGTACTTAACAAGATCTACGCTTTTCCAAAGCCTGACACGAATCCCCTAGTCAAGTTAGTAGCTACTGGTCTTATAAATTACGAGGGAGAAAAATGGAACAAGCACAGAAGAATAGTTAGTCCTGCATTCAATATGGAAAAGTTGAAGAATATGTTACCAATATTCTTCAACAGTTGCAATGATCTAATTATCAAGTGGGAGGAGATGTCTTCAGATGGATCCTGTGAAATAGATCTATGGCCTTTCCTTCAAAATTTAACCAGTGATGTTATTGCTCGAGCAGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTGAACTTCTAAAAGAGCAAGCACAACTTGCAGCGCAAAGTATGATGAAAGATTACATCCCTGGATGGAGGCTCATTCTGCTTATTTACGAATTTATACCAACTGCTATGCATAGGAGGATGAAGGAAATTAATAGAGAAATAAAAGCTTCACTTACAGATTTGATTAACAAGAAAGAGAAAGCACTAGAGGTGGGTGAAACTACTGAGAATGACTTGTTATGTTTACTTTTGGAGTCAAATCACAAGGAAATTGAAGAACATGGAAACAGTAAGACTATTGGAATGAGTATTGAAGAGGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAAACCACTTCAATTTTACTTGTTTGGACCATGGTGATCTTAAGTATGCACCCTGATTGGCAAGCACGTGCAAGGGAAGAAGTTTTACAAGTATTTGGAAAACAAAAACCCGATTTTCTTGTGCTAAGTCACCTTAAGATTGTCACAATGATTTTGAATGAAGTTCTTAGGCTGTACTCAGCAGTAATTGGCCTTAATAGAAATGTTGACGAAGATGTGAAACTTGGAAACCTATCATTACCCGCCGGAGTGCAAGTTTCCTTACCAATAATTATGGTTCACCATAACCCTGAACTTTGGGGTGATGATGCCGATAGTTTTAATCCGGAAAGATTTTCTGAAGGAGTTCTAAAGACCACTAATGGCAGAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGAGTGTGCATTGGACAAAACTTTTCCATGTTGGAGGCAAAGATGGCTTTGTCAATGATTTTACAACATTTCACATTTGAACTTTCTCCAGCTTATGCTCATGCACCTGTTTCAGTGATTACTCTTAAACCCCAATATGGTGCTCATGTCATTTTACGTAAACTGCAAGTATAA 1593 0.3879 MEESWSTTTSASACIVLIVLLTLTCAWWVLNWLWLRPKRLERLLRDQGLQGKPYRLFNGDLKQIMKMQKEVTSKPMKLSHDIAPRVFSYHLQSVIKHGKNPFIWFGRKPRVIITEPELIKEVLNKIYAFPKPDTNPLVKLVATGLINYEGEKWNKHRRIVSPAFNMEKLKNMLPIFFNSCNDLIIKWEEMSSDGSCEIDLWPFLQNLTSDVIARAAFGSSYEEGRRIFELLKEQAQLAAQSMMKDYIPGWRLILLIYEFIPTAMHRRMKEINREIKASLTDLINKKEKALEVGETTENDLLCLLLESNHKEIEEHGNSKTIGMSIEEVIEECKLFYFAGQETTSILLVWTMVILSMHPDWQARAREEVLQVFGKQKPDFLVLSHLKIVTMILNEVLRLYSAVIGLNRNVDEDVKLGNLSLPAGVQVSLPIIMVHHNPELWGDDADSFNPERFSEGVLKTTNGRVSFFPFGWGPRVCIGQNFSMLEAKMALSMILQHFTFELSPAYAHAPVSVITLKPQYGAHVILRKLQV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0846 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Vra3g0846 530 PANTHER CYTOCHROME 15 523 - -
Vra3g0846 530 SUPERFAMILY Cytochrome P450 84 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 Gene3D Cytochrome P450 34 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 Pfam Cytochrome P450 96 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra3g0846 530 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0846 Vra-Chr3 8597252 8600199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0846 12 528 Cytochrome P450 AT3G14690 54.406 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0846 - K23809 gmx:100780780 851.277