Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0836 ATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCGTTTAATGGCAAAAGTGGTGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGTTTAGGCCACTCTTTTTGTTACGTGAGGCCTTCTATTTTTGAATCTCCTGCCATTACCCCTTCAAACTCTGAGAGGTTCACCGTTGATTCTAGCACCCTTGATTCTGAGACATTGAGTGGTTCATTTAGGCATGAGAGCATCGAAGAGAGGCCTGGCAAGAATGTTCCGGAGACAACATTCAAGACAATATCAGGGGCTTCGGTCAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAATGCTCTACTTGCTAGTGATGTTCTAGAGCCTGCTGCATCCTTTGAGGGAACCTCGTCCTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGCGGTTCTGGACCTTTGAATGGATTCATGTCGGGACCCTTGGAGAGATTTGCTTCCGGTCCCTTGGATAAGGGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGAGTAATGTCAGGACCTCTTGATGCCACTGACAAGTCCAACTTCTCAGCCCCCCTTGCTCGTGGTCGCCGAAGGCCACACCTCCAGCGCCTCATGAGAAGTGTGAGTGGTCCAATGAGAAACACTTTTTCTCGGACTTTTTCCAAGAACTCCATGGGTGTCAGTTGGGTGCAGCGGTTATTCCTTCATCCGGTGTCTCAACTAGCTTGGAATTCCAAAGAGGCGAAGTTTCGGTCTGAAGTTTCTAGAAACTGTACTGAAGTTGGATCATCTGATTTGGAGTATAAACATACACAAAATTTGCAGTGGGCTCATGGTAAGGCCGGTGAAGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTTTATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAAGATAATCCTGTTGATCCACTCAAACCTGATGTCCTTAATAATGGAAATGATGTAGTTGCTCTAGAATCCGGTAGGGAGGAAACGTCTGATGCTAATAACATTTCAAATGAAGAAAGACCGTGCTGTACAGGAACTTCTTGTCCAGTAATGGTCAAGGATCAGCCATCTAATAGTGAGATAGTGGAGGTAAATGCTGAAATTGAGGTAAATGTTGAACAGAAAAATTGTGGAAGTCCCAGTATTGAGCATCCTGTTCCTGTATCTGTTCCAATTGGACAATTGAGTGGTCAAGGCAGAAGAAGTGTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAAGTGTCAGAACAAGGCAAGGATTCTATAGTTCCTGCTGAAATAACACAAGAAAGGCAGTTGAGGTTCTGCTCATCTGATGGTAAAGAGGATAGATCTGGACACCAGGATGAGTGTCCTACTACTTCGGGGGAAAATGGACGCCCTGGGTTTAGTTCGACTAATCTGGAGCCTATAGCTCCCTTTTCTGTTTCAGGACAAAGACAGAATATAAGAAAGTCATTTATTGGTACAAAAATCAGAAAAATGTACAGGAAACAAAAGTCCTTACGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACTTGTTTTGACAAGAAATTAGTGAAATCCTCAGGACCCATTAGAATATGTAAGTCTGGAGTAGATCATAGTGCAGTTTTAAGAGCAATGGCTCGGGCTCTTGAAAGAACAGAAGAAGAATACTTGAAAATGGTGGAGAATAGTATGGATAAAAATCCAGAGCTTGCCTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTCTATGTTATGAACCTAGGAGATAGTCGAGCCATTTTGGCTCAAGAACGACCAAATGATCGTCATCCTAATCCATGTCTCGTCAAAGATGACATGAGGCATAGGAATCGTTCTAGAGAGTCATTAGTAGGCATGGAGCTGGACAGAATTTCGGAGGAGTCCCCAGTGCACAATATTAATAAGCATGTTAACAAGATAAACAAAAATCGAGAGATATCCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCTACAGATCACAGCACAAGTATAGAAGAGGAAGTTTTTAGAATAAGAGCAGAACACCCTGATGATAATCAGGCCATATTTAATGATCGAGTGAAAGGACAATTAAAAGTGACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCATGTTTTAACGAACCTCTACTGAAGATGTTTCGAGTTGATTATGTGGGCAATGGTCCTTACCTAAGTTGCGCTTCGTCTGTTGTTCATCATCGGCTTTCTTCAAGTGATCGGTTCCTGGTGCTGTCTTCTGACGGCTTATACCAATATTTCAGCAATGAAGAGGTAGTCGCCCATGTCACCTGGTTCATGGAAAATGTTCCCGAAGGCGATCCTGCACAATACCTTATAGCAGAGCTTCTATTCCGTGCCGCAAAAAAGAACGGAATGGATTTTCATGAATTGCTGGATATTCCTCATGGAGATCGCCGTAAATATCATGATGATGTTTCTGTTATGGTGGTTTCCTTGGAGGGAAGGATTTGGAGATCATCCGGATAA 2664 0.4336 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEERPGKNVPETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPHLQRLMRSVSGPMRNTFSRTFSKNSMGVSWVQRLFLHPVSQLAWNSKEAKFRSEVSRNCTEVGSSDLEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNPVDPLKPDVLNNGNDVVALESGREETSDANNISNEERPCCTGTSCPVMVKDQPSNSEIVEVNAEIEVNVEQKNCGSPSIEHPVPVSVPIGQLSGQGRRSVRLYELLQMESWNEQVSEQGKDSIVPAEITQERQLRFCSSDGKEDRSGHQDECPTTSGENGRPGFSSTNLEPIAPFSVSGQRQNIRKSFIGTKIRKMYRKQKSLRKKLFPWSYDWHREETCFDKKLVKSSGPIRICKSGVDHSAVLRAMARALERTEEEYLKMVENSMDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPCLVKDDMRHRNRSRESLVGMELDRISEESPVHNINKHVNKINKNREISMCRLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPCFNEPLLKMFRVDYVGNGPYLSCASSVVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0836 887 PANTHER PROTEIN PHOSPHATASE 2C 32 11 887 - -
Vra3g0836 887 MobiDBLite consensus disorder prediction 477 491 - -
Vra3g0836 887 MobiDBLite consensus disorder prediction 477 516 - -
Vra3g0836 887 Pfam Protein phosphatase 2C 703 849 IPR001932 -
Vra3g0836 887 Pfam Protein phosphatase 2C 600 647 IPR001932 -
Vra3g0836 887 PANTHER PROTEIN PHOSPHATASE 2C 11 887 IPR015655 GO:0004722|GO:0006470
Vra3g0836 887 ProSiteProfiles PPM-type phosphatase domain profile. 269 878 IPR001932 -
Vra3g0836 887 SUPERFAMILY PP2C-like 283 879 IPR036457 -
Vra3g0836 887 Coils Coil 585 605 - -
Vra3g0836 887 SMART PP2C_4 271 876 IPR001932 -
Vra3g0836 887 MobiDBLite consensus disorder prediction 492 516 - -
Vra3g0836 887 CDD PP2Cc 580 878 IPR001932 -
Vra3g0836 887 Gene3D - 245 412 IPR036457 -
Vra3g0836 887 Gene3D - 521 884 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0836 Vra-Chr3 8497544 8503907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0836 1 887 PP2C-type Phosphatase Gene Family AT2G46920 63.667 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0836 - - gmx:100786856 1670.98