Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0818 ATGACATTGTGTGTGATAAGAACAAATCGAGGCCTAGTTAAGCCAGGGAAGGAGACTCCCTTGACCACACTAGATTTGTCAGTGATCGATAGGTTACCTGTTCTAAGATGCAATGCTCAAACCTTGCATGTGTTCAAACACGGTCCTCAAGCAACAAAGGTCATAAAAGAGGCCCTCTCCAAAGCACTCGTTCCCTATTACCCTCTTGCGGGAAGACTCAAAGAATCGCAAATAGGGTGCCTTCAAATTGAGTGCTCAGGTGATGGGGTCTGGTATGTTGAGGCATCTTCCGATTCCACCCTTCACTCTCTTAATTTCTTTGATGATCTTCACTCTATTCCTTATCACCATCTTCTTCCTGATGCTGTTCCCGAGACCCAAGGCATCCAACCCCTCGTGCAAATGCAGGTGACACAATTTGGTTGCGGGGGTTTTGTGATAGGCCTCATATTCTGCCACAGCATATGCGATGGTCTTGGTGCTGCACAGTTTCTAAATGCAGTAGGGGAACTAGCTAGGGATCTTGAGAAACCTAGCATTGAACCAGTGTGGCACAGGAACTTCTTTCCACCTTCTCAAACCCCCCAACAAACTGCATTGCCACCGGCACCACTCGTTCCTCCTCAAATGCCAGAATACAAACTACAGCATGCTAACATAGACATGCCTCTGGATCAAATCAACCGTCTGAAAAGAGAATTTCAACTAGTTACTGGACTCAATTGCTCCACCTTCGAGATTGTTGCAGCAGTATGTTGGAGCAGTCGAACAAGGGCCATTCGATTCGAGCCAAATACGGAACTGAAGCTAGTTTTCTTTGCAAATTGCCGTCAACTGTTGGACCCAGCTCTGCCCAATGGCTTCTACGGCAATTGTTTCTTCCCAGTGACGATCACGGCTTCGTGTGAGTCGCTTAGGAATGCAACAACGGTTGGTGTGGTGAAGCTTATACAAGAAGCCAAGGCCAAGTTAGGCGTGGAATTTGACAAGTACTTGAAGGGCGAGCATTTGAATAATGGAGAAGACCCTTTTGCGCCTCCACTCACCTACACCACCATGTTCGTATCTGAATGGGGAAGGCTGGGATTCAACCACGTGGACTATCAATGGGGCCCACCCGTCCACGTGGTTCCCATCCAAGGGTCTAGCATTATACCAGTGGCCATTGTGGGGTCCATGCCTCTTCCCAAGAAAGGGATTCGTTTGATGACGTGGTGCGTGGAGGAGGCACATCGCGTTCCTTTCCTCCATGAGATGCATGGGGTGATGAACGAGGGACTGAGTATGTAA 1290 0.4837 MTLCVIRTNRGLVKPGKETPLTTLDLSVIDRLPVLRCNAQTLHVFKHGPQATKVIKEALSKALVPYYPLAGRLKESQIGCLQIECSGDGVWYVEASSDSTLHSLNFFDDLHSIPYHHLLPDAVPETQGIQPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAVGELARDLEKPSIEPVWHRNFFPPSQTPQQTALPPAPLVPPQMPEYKLQHANIDMPLDQINRLKREFQLVTGLNCSTFEIVAAVCWSSRTRAIRFEPNTELKLVFFANCRQLLDPALPNGFYGNCFFPVTITASCESLRNATTVGVVKLIQEAKAKLGVEFDKYLKGEHLNNGEDPFAPPLTYTTMFVSEWGRLGFNHVDYQWGPPVHVVPIQGSSIIPVAIVGSMPLPKKGIRLMTWCVEEAHRVPFLHEMHGVMNEGLSM* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0818 429 Pfam Transferase family 8 379 - -
Vra3g0818 429 Gene3D - 3 201 IPR023213 -
Vra3g0818 429 Gene3D - 202 413 IPR023213 -
Vra3g0818 429 PANTHER ACYL TRANSFERASE 4 1 421 - -
Vra3g0818 429 PANTHER ACYL TRANSFERASE 4 1 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0818 Vra-Chr3 8324975 8326886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0818 12 385 Monolignol Biosynthesis Gene Families AT5G48930 29.500 1.64e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0818 - - gmx:100783128 716.457