Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0798 ATGGAAGAAACATTTGTACCCTTTGAAGGAATCAAGAATGATCTCAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGACGGGAGGATTCAAAGCAGGTTTAAGGATTTGGGCGCCCACCACATACATATTCTTTGCTTCGGCAATACCGGTCATTTCATTCGGGGAACAACTAGAGCGAGATACTGACGGTGTTCTAACTGCTGTTCAAACATTGGCATCTACTTCAATATGTGGCATCATACACTCAATCCTTGGAGGTCAACCTCTGCTGATTTTAGGAGTGGCAGAACCTACCGTGATCATGTACACATTCATGTTCAATTTTGCAAAAGAGAGACCAGAGTTGGGCCGGGATTTGTTTCTGGCATGGACTGGATGGGTATGTGTCTGGACTGCAGTGTTGCTATTCCTGCTGGCCATCTTGGGAGCTTGCTCTATAATCAACAGGTTTACCCGTATTGCAGGAGAGTTATTTGGCATGCTTATTGCAATGCTCTTCATGCAGCAAGCTATCAAAGGACTCGTTGATGAGTTTCGCATACCACAACGAGAAAATCCAAAATCAATTCAGTTCATACCTTCATGGAGGTTTGCTAACGGGATGTTTGCTCTAGTCCTTTCATTTGGCCTTCTCCTCACTGCATTAAGAAGCAGAAAGGCCAGGTCATGGCGCTATGGTACTGGTTGGCTTCGCAGCCTAATAGCAGACTATGGTGTGCCACTTATGGTCCTAGTTTGGACAGGTGTATCCTACCTGCCTTCTGGAAGTGTTCCACATGGTATTCCAAGGCGCCTGTTCAGCCCGAATCCATGGTCACCAGGTGCATATGAGAATTGGACTGTTGTTAAGGATATGGTCCATGTTCCTGTTGTCTACATAATTGGAGCATTTATCCCAGCCACTATGATTGCTGTGCTTTATTACTTTGACCACAGTGTAGCATCCCAGCTTTCCCAGCAGAAGGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTACGACTTGCTCCTTTTGGGATTTTTGACCTTAATGTGTGGCCTTATTGGAATTCCTCCAGCAAATGGAGTGATACCACAGTCTCCAATGCACACAAAGAGTCTGGCAACTCTTAAACATCAGTTGCTTCGGAACAAACTGGTGGTAACCGCACGAAAAAGTATGGGAAAGAATGCTAGTATAGGACAGTTATATGGCAACATGGTAGAAGCATACCATCAAATGCAGACGCCTCTTATTTACCAGGATCCCTCTGCTCGAGCACAAGGACTAAAAGAACTTAAAGAATCAACTATTCAAGCAGCTACCAGTATGGGAAACATGGATGCCCCAGTTGATGAGACTATATTTGACGTTGAGAAAGAAATAGACGATTTGCTGCCTGTGGAGGTTAAGGAACAGCGTCTGAGTAACTTGCTTCAAGCAATAATGGTGGGAGGGTGCGTTGCAGCCATGCCTGTCCTCAAGAAAATACCAACCTCAGTCCTTTGGGGCTATTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAACCAATTCTGGGAAAGGATCTTACTGCTCTTCACTGCACCAAGCAGAAGATACAAGGTTCTTGAGGATTACCATGCTACTTTTGTAGAAACTGTTCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACCATTTACCTTCTTGTATGTTTTGGACTAACATGGGTTCCTATTGCCGGGGTCATGTTCCCCATGATGATCATGCTCTTAGTTCCGGTAAGACAGTACTTTCTCCCCAAATTTTTCAAGGGGGCACACCTTCAAGACTTGGATGCAGCAGCGTATGAAGAGCAAACAGCTTTGCCATTCAACCTTGCAACACAATCAGAGTTTGGAGGTGGTGCTTCTCATGTTGGAGAAGGTGAGATACTAGATGAAGTTATCACAAGAAGCCGTGGAGAGTTTAGGCACACTAGCAGTCCAAAGATCACAAGCTCCACCCCAACACCAAAAACTGATCCCAGAAGCCATCTAAGTCCACGCCTCTCGTTTAGTTCACGAGTGGGTGAACTGAAAACTGAGCAAAGTCCTCGATCTGGTGCAAGAGGTCCCCTCAGTCCAAAGGCTGGAGAAGTGAGACTATCGAATCTGGGAAGAACTCCTCTTAATCAGGATTCAAAACAGCAGGACCACAGCTAA 2172 0.4503 MEETFVPFEGIKNDLRGRLMCYKQDWTGGFKAGLRIWAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTSICGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRDLFLAWTGWVCVWTAVLLFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPQRENPKSIQFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGTGWLRSLIADYGVPLMVLVWTGVSYLPSGSVPHGIPRRLFSPNPWSPGAYENWTVVKDMVHVPVVYIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVVTARKSMGKNASIGQLYGNMVEAYHQMQTPLIYQDPSARAQGLKELKESTIQAATSMGNMDAPVDETIFDVEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLVCFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGAHLQDLDAAAYEEQTALPFNLATQSEFGGGASHVGEGEILDEVITRSRGEFRHTSSPKITSSTPTPKTDPRSHLSPRLSFSSRVGELKTEQSPRSGARGPLSPKAGEVRLSNLGRTPLNQDSKQQDHS* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0798 723 MobiDBLite consensus disorder prediction 649 684 - -
Vra3g0798 723 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Vra3g0798 723 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Vra3g0798 723 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016021
Vra3g0798 723 MobiDBLite consensus disorder prediction 641 723 - -
Vra3g0798 723 PANTHER BORON TRANSPORTER 2-RELATED 1 703 - -
Vra3g0798 723 PANTHER ANION EXCHANGE PROTEIN 1 703 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0798 Vra-Chr3 8156514 8161055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0798 1 694 Antiporters AT3G62270 82.446 0.0 1172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0798 K24194 - gmx:100776705 1379.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0798 3 8156514 8161055 Vra3g0798 3 8156514 8161055 ECH