Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0761 ATGAGGTTAGAAAAATTGTTGCTATTTTGGAACTTGATGTTGTTTTCTATCCTTGTCCAAGAAATGGTCCAAATTTCCGTCCAAAGGTTCTTCAGATGGGTGGTAAACTGCAGTTCCCCTACATGGACAACGAGTTTTTCTTTGAGTTTGGCTGCAAAACAGGACAAAACTATCATGGCAGAATGGTTGCCTGAACTTAAGACTGCTATTTTGAGTGCTCAACAGAGCTTGGAAGATTGCAAATATGTCGGTGGATTGGATTATGGCAAGTGTCTAATTACTGGTGAACCACATACTATAGATGATATTGTACCAATCAAGACAGGGAAGGTATGGTGGTATTCTTCTAATATTGGGTGTGGATTTTGTACTAAAAGCCCTCTTGTTGTGCTTTACTTTTCAAGAGAAGCAAATCTGCAACCCAAAGGGTTCTTCACAAACATCTTCATGGTGAGGTAG 459 0.3965 MRLEKLLLFWNLMLFSILVQEMVQISVQRFFRWVVNCSSPTWTTSFSLSLAAKQDKTIMAEWLPELKTAILSAQQSLEDCKYVGGLDYGKCLITGEPHTIDDIVPIKTGKVWWYSSNIGCGFCTKSPLVVLYFSREANLQPKGFFTNIFMVR* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0761 152 Pfam HAUS augmin-like complex subunit 5 42 86 IPR029131 GO:0051225|GO:0070652
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0761 Vra-Chr3 7861703 7867034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0761 87 111 U-box Gene Family AT1G04510 84.000 6.15e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0761 K16588 - vra:106757846 316.235