Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0739 ATGTCAAACGATGCCGTTTGCTTCTATTCGGTGCTTGGGATTGGCAAACATTCCAGCGATGGTGAAATTCGATGCGCTTATCGTAGGATGGCTCTGAAGTGGCATCCTGATAGATGTAGCAAGGACCCAAAGTTTGCACTGGAGGCAAAAAAACAGTTTCAGCACGTTCAAGAGGCTTATTCAGTTTTGTCCAACACGGGGAAGAGAAGGATATATGATGCTGGTTTGTTTGGTCTAATTGGAGACGACGATGATGAGGGGTTTGTTGATTTCATGCAAGAAATGGTTTTGATGATGCAGAACGTAAGACCCAAGGATGAGAAAGGAACAATGGAGGATCTACAAGGACTGTTAAGGGATATGATGATGAAAGAAAATGAAGGAATAGGGAAGCCTGGGTTTAGCTGTAATTCATCTCCATGTCCAACAAAGAGGACACGTATTTCATGA 450 0.4311 MSNDAVCFYSVLGIGKHSSDGEIRCAYRRMALKWHPDRCSKDPKFALEAKKQFQHVQEAYSVLSNTGKRRIYDAGLFGLIGDDDDEGFVDFMQEMVLMMQNVRPKDEKGTMEDLQGLLRDMMMKENEGIGKPGFSCNSSPCPTKRTRIS* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0739 149 MobiDBLite consensus disorder prediction 129 149 - -
Vra3g0739 149 MobiDBLite consensus disorder prediction 132 149 - -
Vra3g0739 149 Gene3D DnaJ domain 1 85 IPR036869 -
Vra3g0739 149 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE 2 148 - -
Vra3g0739 149 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Vra3g0739 149 CDD DnaJ 7 65 IPR001623 -
Vra3g0739 149 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Vra3g0739 149 SMART dnaj_3 6 68 IPR001623 -
Vra3g0739 149 PRINTS DnaJ domain signature 9 27 IPR001623 -
Vra3g0739 149 PRINTS DnaJ domain signature 27 42 IPR001623 -
Vra3g0739 149 PRINTS DnaJ domain signature 48 68 IPR001623 -
Vra3g0739 149 PANTHER PUTATIVE, EXPRESSED-RELATED 2 148 - -
Vra3g0739 149 Pfam DnaJ domain 8 73 IPR001623 -
Vra3g0739 149 SUPERFAMILY Chaperone J-domain 5 96 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0739 Vra-Chr3 7696255 7697485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0739 7 74 C2H2 Transcription Factor Family AT1G74250 49.275 7.30e-14 65.9