Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0713 ATGATTACTTTACCTCGTCCCATGTTTCTGTTTCTATTGTTTCTTTCGCTCCTAACAAGCCCTGGCCAAATGGTATCTGCAAAAGGGAAGGAGAATGTCACAGAGGCTTGCAGTGTGACAAGGTATCAAAGCCTTTGTATTCAATCTCTGTCACAATTCTCCAACACTGCCGGAAGAAGCCCTAGCAAGTGGGCACGTGCGGGAGTGTCAGTGTCAATTGGCGAGGTTAAGAATGTTAAAGCGTATCTTGCAGAATTGAAGAAGCATGGACACATGAAGGGGAGAAACAAAGTTGCCCTTTCAGATTGTGTTGAATGTTTTTCCTATGCCCTTGACGAGCTTCACAGATCACTTGGTGTGCTTAGAAGGCTAAGCAAAAGCACGTTTAGCACCCAAATGGGGGATCTCAACACGTGGATCAGTGCAGCACTCACCGATGAAGAAACTTGCCTCGAAGGGTTTGAAGGAGAAAATGAGAAGCACGTTAAAGTGCTGCAAAACCGTGTTCAGAATGTCTCTTACATCACCAGCAACGCTCTTGCTCTTGTCAACAAACTTGCCACCACAGATGTCTTCTTTACAGATTCTGAGTGCTGTCTTTTTTATGCTGTTGATTCAGTTGGTCGTAACAGTGTAAAGAGATAA 645 0.445 MITLPRPMFLFLLFLSLLTSPGQMVSAKGKENVTEACSVTRYQSLCIQSLSQFSNTAGRSPSKWARAGVSVSIGEVKNVKAYLAELKKHGHMKGRNKVALSDCVECFSYALDELHRSLGVLRRLSKSTFSTQMGDLNTWISAALTDEETCLEGFEGENEKHVKVLQNRVQNVSYITSNALALVNKLATTDVFFTDSECCLFYAVDSVGRNSVKR* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0713 214 CDD PMEI-like_3 36 188 - -
Vra3g0713 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 181 - -
Vra3g0713 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 186 IPR006501 GO:0004857
Vra3g0713 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 188 IPR035513 -
Vra3g0713 214 SMART PMEI_2 28 182 IPR006501 GO:0004857
Vra3g0713 214 Pfam Plant invertase/pectin methylesterase inhibitor 33 182 IPR006501 GO:0004857
Vra3g0713 214 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 16 181 - -
Vra3g0713 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0713 Vra-Chr3 7496055 7497544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0713 36 191 Carbohydrate Esterase AT3G14310 34.783 1.43e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0713 - - gmx:100791264 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0713 3 7496055 7497544 Vra3g0713 3 7496055 7497544 ECH