Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0710 ATGGCAACCACTGAGTCCGAGAAGCAGGTGATTCTGATTGGAATCGACCAAAGTGATTTCAGCACCAACGCTCTCCTCTGGACTCTCGATCACTTGCTATCGCCAACCCTTAATCATAACTTCAAGCTCGTTCTTGTTTATGCCAGGCCTTCTGTCTCCGCTTCGGTTGGTTTTGTTGGCCCTGGAGCCTCTGAGGTTTTGCCTATTGTCGAAGCGGATTTGAGAAGAATAGCTGCCAAAGTCACTGAAAATGCCATAGATCTATGTCACAAGAAATCCGTAAATGACGTATCAGTGGACGTGATGGAAGGTGATCCTAGGATTGTTCTTTGTGATGCTGTGGAAAAGCACCATGCTTCAATGTTGGTTGTGGGTAGTCATGGTTACGGGGCTCTAAAAAGGGCTGTTTTGGGCAGTGTAAGTGACTATTGTGCTCATCATGCACACTGCACTGTCATGATCGTGAAGAAGCCAAAGCACAAACACTGA 489 0.4663 MATTESEKQVILIGIDQSDFSTNALLWTLDHLLSPTLNHNFKLVLVYARPSVSASVGFVGPGASEVLPIVEADLRRIAAKVTENAIDLCHKKSVNDVSVDVMEGDPRIVLCDAVEKHHASMLVVGSHGYGALKRAVLGSVSDYCAHHAHCTVMIVKKPKHKH* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0710 162 PANTHER - 6 161 - -
Vra3g0710 162 PANTHER UNIVERSAL STRESS PROTEIN A-LIKE PROTEIN 6 161 - -
Vra3g0710 162 PRINTS Universal stress protein signature 8 26 IPR006015 -
Vra3g0710 162 PRINTS Universal stress protein signature 116 128 IPR006015 -
Vra3g0710 162 PRINTS Universal stress protein signature 134 156 IPR006015 -
Vra3g0710 162 Gene3D HUPs 2 162 IPR014729 -
Vra3g0710 162 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 158 - -
Vra3g0710 162 CDD USP_Like 11 155 - -
Vra3g0710 162 Pfam Universal stress protein family 9 156 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0710 Vra-Chr3 7472785 7474930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0710 - - gmx:100306046 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0710 3 7472785 7474930 Vra3g0710 3 7472785 7474930 ECH
Vra8g1226 8 27862612 27863747 Vra3g0710 3 7472785 7474930 PCT