Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0632 ATGGAGAGAAAGAAAGGAAATTGCAGAAGAAGATATATAGTAATATCTGTAGAATCAATGGGTTCTCTCCCGCACGTAGTAGAGGACTGTTTGGGGTTTCTCCAACTCTTTAGCGACGGTTCTATTTTCCGTTCAAACGATATACAGTTCAAAATATCAGCAGTTCAAGATCATTCTGTAACCTTCAAGGACTATCTCTTCCACAAGAGATTCAACCTTTCTCTTCGCTTCTACAAACCCCAACACACCAACAAGCTTCCTATTGTCATTTTCCTTCACGGTGGAGGCTTCTGCTTCGGTTCGCGCACCTGGCCCCATATTCACAACTGTTGCACGCGCCTCGCCGCAGGGCTCCAGGCGGTCGTCCTCTCGCCGGACTACCGCCTCGCCCCGGAACACCGCCTTCCGTCGGCCGTCGACGACGCTGTGGAAGCGGTGAGGTGGCTCCAGAGGCAGGGACTCAGGCTGAAGGAAGATGAAAACGGCGGGGACGACTGGCTGAGTGCTGACGTTGACTTTGACCGCGTGTTTGTCGTCGGTGACTCCTCTGGCGGGAACATTGCCCACCACCTCGCGGTTCGGTTGGGGTCCGGTTCGAGCGAGATGGACCCGGTTCGGGTACGAGGTTACGTGTTGTTTGCGCCGTTTTTTGGCGGGGAGGTTCGGACCAAGTCTGAGGAAGGTCCACCAGAGCACATGCTGAACCTCGAGTTATTGGACAGATTTTGGAGGTTGTCGATGCCTTTGGGAGAATCGAGAGACCACCCATTGGCGAATCCGTTTGGAGCTGGAAGCCCGAATCTTGAAAAAGTGAAGCTTGATCCTATTTTGGTGATAGTTGGTGGGAATGAATTGCTTAAGGATAGAGCAGAAGAGTATGGTAGAAGGTTAAAAGAAAAAGGCAAAGACATTGAATACGTTGAGTTTGAGGGGTGCGAGCATGGGTTTTTCACTCATGATTCATACTCACAACTTGGAGAAGAGGTCATCCAAATCCTTAAACAATTCATGCTTCGGACTTCTGCTTGA 1029 0.5053 MERKKGNCRRRYIVISVESMGSLPHVVEDCLGFLQLFSDGSIFRSNDIQFKISAVQDHSVTFKDYLFHKRFNLSLRFYKPQHTNKLPIVIFLHGGGFCFGSRTWPHIHNCCTRLAAGLQAVVLSPDYRLAPEHRLPSAVDDAVEAVRWLQRQGLRLKEDENGGDDWLSADVDFDRVFVVGDSSGGNIAHHLAVRLGSGSSEMDPVRVRGYVLFAPFFGGEVRTKSEEGPPEHMLNLELLDRFWRLSMPLGESRDHPLANPFGAGSPNLEKVKLDPILVIVGGNELLKDRAEEYGRRLKEKGKDIEYVEFEGCEHGFFTHDSYSQLGEEVIQILKQFMLRTSA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0632 342 PANTHER ARYLACETAMIDE DEACETYLASE 23 338 - -
Vra3g0632 342 SUPERFAMILY alpha/beta-Hydrolases 23 337 IPR029058 -
Vra3g0632 342 PANTHER CARBOXYLESTERASE 15-RELATED 23 338 - -
Vra3g0632 342 Pfam alpha/beta hydrolase fold 89 317 IPR013094 GO:0016787
Vra3g0632 342 Gene3D alpha/beta hydrolase 37 341 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0632 Vra-Chr3 6895551 6898295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0632 26 323 Carbohydrate Esterase AT5G16080 34.740 7.52e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0632 - - vun:114190999 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0632 3 6895551 6898295 Vra3g0632 3 6895551 6898295 ECH
Vra8g1185 8 26996035 26998880 Vra3g0632 3 6895551 6898295 ECH
Vra3g0632 3 6895551 6898295 Vra8g0175 8 2051916 2054652 PCT