Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0595 ATGTCGCAGTTGAACGGAGCCTACTACGGCCCCGCTATTCCGCCGCAGAAGTCCTACAACCGCCCAGGGCGCGGCAGCGGCGTTGGTTGCTGCTGTGGCTGCCTCTTCAGCTGCCTCTTCAGCCTCATCTTCAAGGTGATACTCACGGTGATCATCATCGTGGCCATCGCTGTGTTCATCTTCTGGCTCATAGTCCGTCCGAACATGGTGAAATTCCACGTCACTGACGCCACCCTCACGGAGTTCAACTATACTAACAACACCCTCCACTACGATCTTGCCCTGAACATCACAGTGCGCAACCCTAACAAGAGGCTGGGCATCTACTACGACTTCATCGAGGCGAACGCATTGTTCCACGACGCCAGGTTCAACACCCAGTACCCCGATCCCTTCTACCAGGGGCACAAGACCACGCACGTGCTGAACCCCGTCTTCAAGGGGGAGAAAGTGTTGGTTTTGGACGCTGACCAGAGCTCCGAATTGAAGAAGGAGAACTCCACCGGGTTGTATGAGATCGATGTGAAGATGTACCTGAGGGTGAGGTTCAAGTTGGGCGCTTTCAAGACCAAGACACTCAAGCCCAAAGTCACCTGCGACTTGCGCGTGCCTTTCAAGGGAACCGCCACCGCCTTTGAAACCACCAAGTGCGACTGGGATCGCTGA 666 0.5556 MSQLNGAYYGPAIPPQKSYNRPGRGSGVGCCCGCLFSCLFSLIFKVILTVIIIVAIAVFIFWLIVRPNMVKFHVTDATLTEFNYTNNTLHYDLALNITVRNPNKRLGIYYDFIEANALFHDARFNTQYPDPFYQGHKTTHVLNPVFKGEKVLVLDADQSSELKKENSTGLYEIDVKMYLRVRFKLGAFKTKTLKPKVTCDLRVPFKGTATAFETTKCDWDR* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0595 221 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 22 219 - -
Vra3g0595 221 Pfam Late embryogenesis abundant protein 96 199 IPR004864 -
Vra3g0595 221 PANTHER OS05G0367900 PROTEIN 22 219 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0595 Vra-Chr3 6513829 6514918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0595 64 205 SNARE and Associated Proteins AT1G32270 37.500 4.81e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0595 - - gmx:100793187 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0595 3 6513829 6514918 Vra8g0127 8 1425824 1426507 PCT