Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0586 ATGTCTGCCTCCAGAAAGAAGCTTCTTCTGAGTACAGTGTCCGTGAAACTTGGCTGCGGCACCTGCAGAGGGCCAAAACTCTATCGCATATTCCGTCCAAAGCCTAAACCCAAGAACCTTCCCTCTTACCAAAACCACAAAAACCACTACAACCATTTCTCTTCTTCCTCTTCTTCAGCCCAATGGGCTGACAGCACCAGCACCACCCCCACCAACACCAACACCAACACCACATTCTCTCCCTACGTTGATTCCTCCAACTTTTCTGACTCCGACGTCAAGGCTGCAAGAACAGTGGGGGGTTTGGGAAGAGCTGGCAAAGAAGGGGTGGCGGTGGAGAAAGACTCCGATGACCCTTATCTCGACTTCAGACATTCCATGCTGCAAATGATATTGGAGAACGAGATATACTCCAAGCAAGATCTCAGAGACCTTCTCAGTTGCTTCCTTCAGCTCAATTCACCGCACCATCATGGCGTTATAGTCAGGGCTTTCACTGAGATCTGGAATGGCGTCTTCTCTGGCAGGTCCAATTCACACATCAACCGTAAGCCACGTCAGTTCTAA 567 0.4974 MSASRKKLLLSTVSVKLGCGTCRGPKLYRIFRPKPKPKNLPSYQNHKNHYNHFSSSSSSAQWADSTSTTPTNTNTNTTFSPYVDSSNFSDSDVKAARTVGGLGRAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRDLLSCFLQLNSPHHHGVIVRAFTEIWNGVFSGRSNSHINRKPRQF* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0586 188 MobiDBLite consensus disorder prediction 41 80 - -
Vra3g0586 188 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 177 - -
Vra3g0586 188 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 177 IPR038933 GO:0045892
Vra3g0586 188 Pfam Transcriptional repressor, ovate 116 172 IPR006458 -
Vra3g0586 188 ProSiteProfiles OVATE domain profile. 112 171 IPR006458 -
Vra3g0586 188 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 110 170 IPR006458 -
Vra3g0586 188 MobiDBLite consensus disorder prediction 33 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0586 Vra-Chr3 6451653 6452219 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vra3g0586 Ovate 1.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0586 - - gmx:100804319 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0586 3 6451653 6452219 Vra3g0586 3 6451653 6452219 ECH